KEGG   Phocoena sinus (vaquita): 116747357
Entry
116747357         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04144  Endocytosis
psiu04517  IgSF CAM signaling
psiu04530  Tight junction
psiu04666  Fc gamma R-mediated phagocytosis
psiu04810  Regulation of actin cytoskeleton
psiu05100  Bacterial invasion of epithelial cells
psiu05132  Salmonella infection
psiu05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    116747357
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116747357
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116747357
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    116747357
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    116747357
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116747357
   05135 Yersinia infection
    116747357
   05100 Bacterial invasion of epithelial cells
    116747357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116747357
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116747357
Membrane trafficking [BR:psiu04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    116747357
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     116747357
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 EIF3I SAM_Ste50p Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 116747357
NCBI-ProteinID: XP_032475238
LinkDB
Position
X:complement(15538503..15539485)
AA seq 322 aa
MPGTGIIQIALSPNNHEVHIYKNGSQWVKAHEFKEHNRHITGIDWAPKSDRIVTCRADHN
AYVWGQKGGVWKPTLVILRINCAAAFVKWSLLENKFAAGSRAQLISVCYFESENDWWVSK
HIKKPIRSTVASTPWGSKMPFGQLMSEFGGGGSGTGGWVNVVSFFASGSRLAWVSHDVTV
SVVDASKSVQVSTLKTEFLPLLSVSFGSENSVVAAGHDCYPMLFNYDDRGCLTFVSKLDL
PKESIQHNMSAMEHFHNTDKWATTKDRNTALETLHQNSITQVSLYEVDKQDCRKFCTTGI
DGAMTIWDFKTLESSIQGLWIM
NT seq 969 nt   +upstreamnt  +downstreamnt
atgcctggaacagggatcatacagattgcccttagccccaataaccatgaagtccacatc
tataagaacgggagccagtgggtgaaagctcatgagttcaaggagcacaacagacatatc
acaggtatcgactgggctcccaagagtgaccgcattgtcacttgtagggctgaccacaat
gcctacgtctggggtcagaaaggtggagtttggaagccgaccctggtgatcctgagaatt
aactgcgcagccgcttttgtcaagtggtccctgctagagaacaaatttgctgcgggcagc
agagcacaactcatttctgtttgttacttcgagtcagaaaatgactggtgggtaagcaag
cacataaaaaaacccattcgctccacggtcgccagtacaccctggggcagcaagatgcct
tttggtcagctgatgtcagagtttggtggcggtggcagtggcactggcggctgggtgaac
gtggtcagcttctttgccagcgggagccgcctggcctgggtcagccacgacgtcaccgtg
tctgttgttgatgcctcaaaaagcgtgcaggtctcaactctgaagacagagttcctgccc
ctcctgagtgtgtcgttcggctcagagaacagcgttgtggctgctggccatgactgctac
cccatgctctttaactacgacgaccgtggctgcttgaccttcgtctccaagctagacctc
ccgaaagagagcatccagcacaacatgtcggccatggagcacttccacaacacggacaag
tgggccacgaccaaggaccgaaacacagccctggagacactgcaccagaacagcatcact
caagtgtctctttatgaggtggacaagcaagattgtcgcaaattttgcactactggcatt
gacggagccatgaccatttgggatttcaagaccttagagtcttctatccagggcctttgg
ataatgtga

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