Phocoena sinus (vaquita): 116747371
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Entry
116747371 CDS
T07759
Symbol
TIMP1
Name
(RefSeq) metalloproteinase inhibitor 1
KO
K16451
metalloproteinase inhibitor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04066
HIF-1 signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
116747371 (TIMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116747371 (TIMP1)
Peptidases and inhibitors [BR:
psiu01002
]
Peptidase inhibitors
Family I35: timp family
116747371 (TIMP1)
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Gene cluster
GFIT
Motif
Pfam:
TIMP
NTR
Motif
Other DBs
NCBI-GeneID:
116747371
NCBI-ProteinID:
XP_032475268
Ensembl:
ENSPSNG00000020847
UniProt:
A0A8C9KUR6
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Position
X:42516952..42521089
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AA seq
294 aa
AA seq
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MGEGDGQGEAQGEGEEEGASPFRQPRARPLAYTDGGRMSNASRKPGGLWFPTSCHPAPRL
DIYPPLLRPCRHRRRPSAQRGYTRERTMAPFAPLASGILLLLWLTAPSRACTCVPPHPQT
AFCSSDLVIRAKFVGTAEVNQTTSYRRYEIKMTKMFKGFNALGDASDIRFIYTAAMESVC
GYFHRSQNRSEEFLIAGQLSNGNLYITTCSFVAPWNSLSSAQRRGFTKTYAAGCEECTVF
PCSSIPCKLQSDTHCLWTDQLLTGSDKGFQSRHLACLPREPGLCTWQSLRLQMA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggggagggggatggtcagggcgaggctcagggggagggagaggaggagggtgcatct
ccttttcggcagcccagggcccgccccttggcctacacggatggtgggcggatgagtaat
gcatccaggaagcctggaggcctgtggtttcctaccagctgccaccccgcccctcgcttg
gatatttatcctccgctgctccggccctgccgccatcgccgaagacccagcgcccagaga
ggctacaccagagaacgcaccatggccccctttgcacccctggcctctggcatcctgttg
ctgctgtggctgacggcccccagccgagcctgtacctgcgtcccaccccacccacagacg
gccttctgcagctctgacctcgtcatcagggccaagtttgtggggactgcagaagtcaac
cagaccacctcataccggcgttacgagatcaagatgaccaagatgttcaaagggttcaat
gccttgggggatgcctctgacatccggttcatctacaccgccgccatggagagcgtctgc
ggatacttccacaggtcccagaaccgcagtgaggagtttctcatagctggacaactgtcg
aacgggaacctgtacatcaccacctgcagtttcgtggctccttggaacagtctgagctcc
gctcagcgccggggcttcaccaagacctatgctgctggctgtgaggaatgcacagtgttt
ccctgttcatccatcccctgcaaactgcagagtgacactcattgcttgtggacggaccag
ctcctcacaggctctgacaagggcttccagagccgccaccttgcctgcctgccccgggag
ccagggttgtgcacctggcagtccttgcggctccagatggcctga
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