Phocoena sinus (vaquita): 116747414
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Entry
116747414 CDS
T07759
Symbol
USP11
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 11
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116747414 (USP11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116747414 (USP11)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116747414 (USP11)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116747414 (USP11)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116747414 (USP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
Cys_rich_KTR
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
116747414
NCBI-ProteinID:
XP_032475430
Ensembl:
ENSPSNG00000020487
LinkDB
All DBs
Position
X:42202188..42218551
Genome browser
AA seq
1001 aa
AA seq
DB search
MALESHKTPLSSVPNWRLYPAYSSQRSPPKVRCPPSPSKRPSGVSLFKMAVAPRLFGGLC
FRFRGQKPEVAFVGTFPIPSCDDCERRRTAMAAVAESPAAAAAAEDREPQRKAVPGLESQ
RRQIENGENGRGHPLRAGESWFLVEQHWYKQWEVYVQGGDQDPSTFPGCINNAELFEDQV
NWRLKKGLVEGEDYVLLPAAAWHYLVNWYGLEHGQPPIERKVVELSSIQKVEVYPVELLL
LQHSDMDTAHTAQFSHTDSVDLVLRTAQEQFLVSPQEETRLWIKNAEGSFERLCNTRVTV
LDAALKTGQVVIMETRNKDGTWPSAQLPAMSSASEEDEDFQGQPGICGLTNLGNTCFMNS
ALQCLSNVPQLTNYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVF
KTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEA
WQNHKRRNDSVIVDTFHGLFKSTVVCPDCGNVSVTFDPFCYLSVPLPMTHKRVMEVFFVS
MDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVSPERMMVADVFSHRFYKIYQLEESLSS
ILDRDDIFIYEVSGRAAIGENSREDVVLPIYLRERTPARDYNNSYYGLMLFGHPLLVSVP
RDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDLEDKDNLPKPGHVAGGSSQDPGTE
QAGPSSGVAGGSRAPVDNSPGPSHWPQRARRKHLFTLQTVNSNGTSDRSTFNEDTHAQPY
IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKAPVRLQECIELFTTTETLEKENPWYC
PNCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSKFVIKPQ
NESAPELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAA
YVLFYQRQDVARRLQPQPSLSDPPASPACGTPANSEFMDIN
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagaatcccacaagacacctttgtcttcagttcccaactggaggctttacccc
gcctattcgtcgcagagatcaccgcccaaggtccgatgcccgcctagcccctcgaagcgt
ccgagcggggtctcccttttcaaaatggcagtagccccccggctgtttggggggctctgt
ttccgtttccggggacagaagccggaagtagcatttgtggggacttttcctatccccagc
tgcgatgactgtgagaggaggcgaacggccatggcggcggtggcagagagtccggcggct
gcggctgcggccgaggaccgagagccacagcgtaaagcggtgccgggcctggagagccag
cggcgccagatcgagaacggcgagaatgggcgagggcatccgctgcgggcgggcgaaagc
tggttcctcgtggagcagcactggtacaagcagtgggaagtatacgtgcagggaggagac
caggaccccagcaccttccctggttgcatcaacaatgctgagctctttgaagaccaggta
aactggcgcctcaagaagggactggtggaaggtgaggactatgtgctgctcccagcggct
gcttggcattacctggtcaactggtatggtctagagcatggccagcctcccattgaacgc
aaggtcgtggagctgtccagcatccagaaagttgaagtgtacccagtagaactgctgctc
cttcagcacagtgatatggacacagctcacactgctcagttcagccacacagattctgtt
gacctagttctgcgcaccgctcaagagcagtttctggtgagcccccaggaagagacacgg
ctgtggatcaagaacgcggagggctcttttgagaggttgtgcaacacacgtgtcacagtg
cttgacgccgctctcaagactgggcaggtggtcatcatggagacccgaaacaaggatggc
acttggcccagcgcacagctgcccgccatgagcagcgcgtcggaggaggatgaggacttc
cagggccagccgggcatctgtggtctcaccaatctgggcaacacgtgcttcatgaactcg
gccctgcagtgcctcagcaacgtgccacagctcaccaactacttcctcaaaaaccgctac
ctggaggagctcaacttctgcaacccactgggcatgaagggggagatcgcagaggcctat
gcggacctggtgaagcaggcgtggtccggccaccaccgctccatcgtgccccacgtgttc
aagaccaaggtcggccactttgcgtcccagtttctgggctaccagcagcatgactcacag
gagctgctgtcgttcctcctggatgggctgcacgaggacctcaatcgtgttaagaagaag
gaatatgtggaactgtgcgatgctgctgggaggccagatcaggaggttgctcaggaggcc
tggcagaaccacaaacggcggaacgattctgtgattgtggacactttccatggcctcttc
aagtccacggtggtgtgccctgattgtggcaacgtgtctgtgaccttcgaccccttctgc
tacctcagtgtcccattgcctatgacccacaagagggtcatggaggtcttctttgtctcc
atggacccccgccgcaagccagagcagcaccggctcgtggtccccaagaaaggcaagatc
tcggatctgtgtgtggctctggccaaacacactggtgtctcgccagaaaggatgatggtg
gccgatgtcttcagtcaccgcttctacaagatctaccagctggaggagtctctgagcagc
atcttggaccgagatgatatcttcatatacgaggtgtcaggcagggctgctattggcgag
aactccagagaggacgttgtgcttcctatctacctgcgggagcgcaccccagcccgggac
tacaacaattcttactatggcctgatgctctttgggcacccgctcctggtgtcggtgccc
cgggaccggctctcctgggacgccctgtatcacatcctgctgtaccgcctctcacgctat
gtgaccagacccagctcggatgacgaggatgatggggatgagaaagacctggaggataag
gacaacctccctaagcctggacatgtggctgggggcagctcccaagaccctgggacggag
caggctgggcccagctctggagtcgcgggcgggagccgggcccccgtggacaactcccct
ggaccatcccactggccccagagagcacggcgcaagcacctcttcaccctgcagacagtg
aattccaatgggaccagcgaccgctcgaccttcaacgaggatacccatgcccagccgtac
attgccatcgactgggagccagagatgaagaagcgttactatgacgaggtggaggctgag
ggctacgtgaagcatgactgtgttgggtacgtgctgaagaaggctccggtgcggctgcag
gagtgcatcgagctcttcaccaccactgagaccctggagaaggaaaacccctggtactgc
cccaattgcaagcagcaccagctggccaccaagaagctggacctgtggatgctgccggag
acgctcatcatccacctgaagcgcttttcctacaccaagttctcccgcgagaagctggat
acccttgtggagtttcctatccgggacctggacttctccaagtttgtcatcaagccgcag
aacgagtcggccccagagctgtacaaatatgatctcatcgcagtttccaaccattacggg
ggcctgcgggatggacactacacgacatttgcctgcaacaaggacagcggtcagtggcac
tacttcgatgacaacagtgtctcacctgtgactgagaatcagattgagtccaaggcagcc
tatgtcctattctaccaacgccaggatgtggcacgtcgcctgcaaccccagcccagctta
tctgaccccccagcgtccccagcctgtggtaccccagccaactctgagttcatggatata
aattga
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