Phocoena sinus (vaquita): 116747429
Help
Entry
116747429 CDS
T07759
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116747429 (APEX2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116747429 (APEX2)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116747429 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
116747429
NCBI-ProteinID:
XP_032475462
Ensembl:
ENSPSNG00000018132
UniProt:
A0A8C9CGP4
LinkDB
All DBs
Position
X:complement(48215023..48222785)
Genome browser
AA seq
515 aa
AA seq
DB search
MLRVVSWNINGIRSPVQGVGYEEPSNCTAMTMGRILDKLDADIVCLQETKVTRDVLTEPL
AIIEGCNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATQNGDVGCYGNMDDFT
QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDHLLSNLGCQAGSHM
GPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVMDTFQASFLLPEVM
GSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVRLEQDPVFRQSALQLS
NQTPVQMRQNKARVRSTRSRPSQPGSSRGQKNLMSYFQPSSSRPQASPNLGLPSLGNLMT
PKTSEEDVMANVVEGRAKASEAKDEKEVRTSFWKSLLGGPLPMPLCGGHREPCVMRTVKK
PGPNLGRHFYMCARPQGPPTDPSSRCSFFLWSRPS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtggtgagctggaacatcaatgggattcgcagccccgtgcaaggggtggga
tacgaggagcccagcaattgtaccgccatgaccatggggcgcattttggacaagctggat
gctgacatcgtctgtcttcaggagaccaaagtaaccagggatgtgctgacagagcccctg
gctatcattgagggctgtaactcctatttcagcttcagccgcaaccgtagtggctattct
ggtgtagccaccttctgtaaggacagtgctaccccagtggctgctgaagaaggcctgagt
ggcctacttgccactcagaatggggacgtgggttgctacggaaacatggatgacttcact
caagaggagcttcgagctctggatagtgagggccgggccctcctcacacaacacaagatc
tgcacatgggaagggaaggagaagaccttgaccctaatcaacgtgtactgcccccatgcg
gaccctgggaagcctgagcggctcgcctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagccctcctggcagctggcagccatgttatcattctgggggacctgaataca
gctcaccgccccattgaccactgggatgcagtcaacctggaatgctttgaagaggaccca
ggtcgcaagtggatggaccacttgctcagtaacctggggtgccaggctggttcccatatg
ggacccttcattgatagctaccgatgcttccatccaaagcagaagggggccttcacctgc
tggtccacagtcagtggcgcccgccatctgaactatggctctcggcttgactatgtgctg
ggagacaggaccctggtcatggacacctttcaggcctccttcttgctgcctgaggtgatg
ggctctgaccactgccctgtgggtgcagtcttaagcgtgtcttctgtgccggcaaaacag
tgccctcctctgtgcacccgcttcctccctgagtttgcaggcacccagctcaagatcctt
agattcctagttcgtctcgaacaagatcctgtgttcaggcagtcagcgctacagctcagc
aatcaaacaccggtacagatgcgccaaaacaaagctcgtgtgcgctcgaccaggtctcgg
ccaagtcaacctggttccagtagaggccaaaaaaacctgatgagctacttccagccatcc
tccagtcgtccccaagcttctcctaacttggggcttcctagcctgggcaacctcatgacc
ccaaagacctcagaagaggacgtgatggccaatgtggtggaggggcgggccaaggcttca
gaggccaaggatgaaaaggaggtacggacctcattctggaagtctctgctgggggggccc
ttgcccatgcccctgtgtgggggccacagggagccgtgtgtaatgcgaactgtgaagaag
ccaggacccaacctgggccgccacttctacatgtgtgccaggccccagggtcctcccact
gacccctcctcccgctgcagcttcttcctctggagcaggcccagctga
DBGET
integrated database retrieval system
