Phocoena sinus (vaquita): 116747452
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Entry
116747452 CDS
T07759
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747452 (FMR1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116747452 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
116747452 (FMR1)
mRNA cycle factors
Stress granule specific factors
116747452 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
MlrA_C
Motif
Other DBs
NCBI-GeneID:
116747452
NCBI-ProteinID:
XP_032475554
Ensembl:
ENSPSNG00000016888
UniProt:
A0A8C9CDK3
LinkDB
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Position
X:124940247..124976869
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AA seq
632 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVGAFSVTYDAENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSSNSRVGPTPSEEKKHIDVKE
NSTHFSQPNSTKVQRVLVVSSTVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRG
HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERENFLRRGDGRRRGGGGRG
QGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRAADGSLQIRVDCNNERSVHTKTLQNTSG
EGNRLRTGKDRNQKKEKPDSMDGQQPLVNGVP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggcgctttctacaaggcatttgta
aaagatgttcatgaagattcaataacagtggcatttgaaaacaactggcagccagagagg
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaat
gaaagcgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacatacaatgaaattgtcacaattgaacgtttacgatcagttaatcccaacaaacct
gccacaaaagatactttccataaaatcaaactggacgtgccagaagacttacgacaaatg
tgtgccaaagaatcggcacataaggactttaaaaaggcagttggtgccttttctgtaact
tatgatgcagaaaactatcagcttgtcattctgtctatcaatgaagtcacctcaaagcgt
gcacacatgctgattgacatgcactttcggagtctgcgcactaagctgtctctgatactg
agaaatgaggaagccagtaagcagctagagagttcaaggcaacttgcctcaaggtttcac
gaacagtttatcgtacgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagccagaaaggtacctggggtcacagctatcgatctagatgaagatacctgc
acatttcatatttatggggaggatcaagatgcagtgaaaaaggctcgaagctttctggaa
tttgctgaagatgtcatacaagttccaaggaacttagtaggcaaagtaataggaaaaaat
ggaaaactgattcaggagattgtggacaagtcaggagttgtgagggtgagaattgaagct
gaaaatgagaaaaatgttccacaagaagaggaaattatgccaccaaattccctaccttcc
agtaactcaagggttggacctactccttcagaagaaaaaaagcatatagatgtaaaggaa
aacagcactcatttttctcagcctaatagcacaaaagtccagagggtgttagtggtttca
tcaactgtagcaggggaatcccagaaacctgaactcaaggcttggcagggtatggtacca
tttgtttttgtgggaacaaaagacagcatcgctaatgccactgttcttctggattatcac
ctgaactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcaa
ttgcgacagattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggc
tatgtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaataggggg
cacggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttct
gaaacagaatctgaccacagagatgaactcagtgattggtcattagctccaacagaggaa
gagagggagaacttcctgcgcagaggagacgggcgacggcgtggaggtggaggaagagga
cagggaggaagaggacgcggaggtggcttcaaaggaaacgatgatcactcccgaacagat
aatcgtccgcgtaatccaagagaggctaaaggaagagccgcagatggatccctccagatc
agagttgactgcaataatgaaaggagtgtccacactaaaacattacagaatacctccggt
gaaggtaaccggctgcgtacgggtaaagatcgtaaccagaagaaggaaaagccagacagc
atggatggtcagcaaccacttgtgaatggagtaccctaa
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