Phocoena sinus (vaquita): 116747529
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Entry
116747529 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116747529
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116747529
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116747529
NCBI-ProteinID:
XP_032475733
LinkDB
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Position
X:complement(51173183..51212700)
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AA seq
685 aa
AA seq
DB search
MKNDTPLVAEGFLPEDGSGCTVGIQELLDHESVCVATASGDVLLCNLNTHQLECVGSVAS
GISVMSWSPDQELVLLATGQQTLIMVTKEFEPIMEQQIHQDDFGESKFITVGWGRKETQF
HGSEGRQAAFQLQMHESALPWDDHRSQVTWRGDGEFFAMRVVCPETGARKFRVLGREFAL
QSASEPVAGVGPALAQKPSGSLIASMQDKPNQQDVVFFEKNGLLHGHFTLPFLKVEVKVN
DLLXNADSTVLAVWLEDLQREENSTLKTYVQLWTVGNYHWYLKQSLPFGTCGKSEIVSLM
WGPVTPYRLYVLCQGXHYLCYDWHWASDRSSGDNLSDMANVAVVDGNRVLVTVFRQXVVP
PPMCTYRLLLPHPVAQIMFSTHPKKSNDLAVLNASNQIFVYKCGDSPSVDSAVKLGAVGG
NGFNISLRTPHQDKRYIIQFEKSEDEEVSPLKLSLLTWVQEDVFLAVSHSQSTPSSVIHH
LTVAPSEMDNKQGQLNISSYVTVDGVIIHLCCNSKTKSVALQVAGGQIIKYLWESPSLAV
EPWKNPGEFPVRFPYLCAQTELAMIGGEECVLGLTDRCRFFISDTEVASNITSFAVYGEF
LLLTTHSHTCHCFCLRDASLKTAQSSLVACPVSNGESLRKVERGSCIVTVVPQDTKLILQ
MPRGNLEVIHHRALILAQIRKWLDK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgacactcctttggtggcagaaggctttctcccagaggatggaagtggctgc
actgttggtattcaggagttgctggatcacgagtctgtgtgtgtggccacagcctctgga
gatgtcctactttgcaatctcaacacacaccagctggaatgtgtcgggagtgtagccagt
ggtatctctgtcatgagttggagtcctgaccaagaactggtgcttcttgccacaggtcaa
cagaccctaattatggtgacaaaagagtttgaaccaatcatggaacagcaaatccaccag
gatgattttggtgaaagcaagttcatcactgttggctggggcaggaaggagacgcagttc
catggatcagaaggcaggcaagccgcctttcagctgcaaatgcacgagtctgctttgccc
tgggatgaccatagatcacaagttacctggcgtggtgatggagagttttttgctatgcgt
gtcgtttgcccagagacaggggctcgaaagttcagagtgttgggccgggagtttgcttta
cagtcagccagtgagcctgtggcaggagtgggacctgctctggctcagaagccctcaggc
agtttgattgcatctatgcaagacaaacccaatcagcaggatgttgtgttttttgagaaa
aatggacttctccatggacattttacacttcctttcctcaaagttgaggttaaggttaat
gaccttctctagaatgcagattccaccgtgcttgcagtatggctggaagaccttcagagg
gaagaaaattccactctaaaaacctatgttcagctctggactgttggaaactatcactgg
tatctcaagcaaagcctgcccttcggcacctgtgggaagagcgagattgtgtccctgatg
tggggcccagtgaccccataccggctgtatgttctctgtcaaggctgacattacctctgc
tatgactggcactgggcgagtgaccggagctcaggagataatttaagtgacatggcaaat
gtggctgttgttgatggaaacagggtattggtgacagtcttccggcagnntgtggttcca
cctcccatgtgcacctaccgactgctgctcccacaccctgtagctcaaatcatgttctcc
acacaccctaaaaagagtaacgacctcgctgtcctaaatgccagtaaccagatttttgtt
tataaatgtggtgatagtccaagtgtagactctgcggtgaaactgggagctgtgggtgga
aatggatttaacatttctcttagaacacctcatcaggacaagagatacataattcagttt
gagaagagtgaagatgaagaagtaagcccactgaagctcagccttctcacctgggttcag
gaagacgttttcctggctgtgagccacagtcaatccaccccaagctctgtcattcaccat
ctgactgtggccccttctgagatggataacaagcagggacagctcaatattagttcatat
gtgacagtggatggggtcataatccatctgtgctgcaactccaagaccaagtcagtagca
ctgcaggtggctggtggtcagataattaagtacctttgggaatcaccctctctggctgtt
gaaccatggaagaaccctggtgaatttcctgttcgatttccttatctgtgcgcacagacc
gaattggccatgattggaggagaggagtgtgtccttggcctgactgacagatgtcgcttt
ttcatcagtgacactgaggttgcttcaaatatcacatcatttgcagtatatggtgagttt
ttattgttaacgactcattcccatacttgccactgtttttgcctgagagatgcttcattg
aaaactgcccaatcctccctagtggcttgtcctgtgtctaatggggaatctctgcggaag
gtggagaggggttcatgcattgtcactgttgtgccccaggacacaaagcttatattacag
atgccaaggggaaacttagaagttattcatcatcgagccctgattttagctcaaattcgg
aagtggttggacaagtaa
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