Phocoena sinus (vaquita): 116747598
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Entry
116747598 CDS
T07759
Symbol
OPN1LW
Name
(RefSeq) long-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psiu04030
]
116747598 (OPN1LW)
G protein-coupled receptors [BR:
psiu04030
]
Rhodopsin family
Vision
Opsin
116747598 (OPN1LW)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srt
Srg
DUF3810
Motif
Other DBs
NCBI-GeneID:
116747598
NCBI-ProteinID:
XP_032475879
Ensembl:
ENSPSNG00000021893
UniProt:
A0A8C9EDD6
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Position
X:129935127..129946032
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AA seq
364 aa
AA seq
DB search
MAQQWGPQRFAGGQPQTSFEDSTQGSVFTYTNSNSTRDPFDGPNYHIAPRWVYHLTSVWM
VFVLIASIFTNGPVLAATVKFKKLRHPLNWMLVNLAVADLAETVIASTISVVNQMYGYFV
LGHPLCIVEGFTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIAGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIALMITCCFIPLSVIVLCYL
QVWLAVRAVAKQQKESESTRKAEKEVTRMVMVMIFAYCLCWGPYTFFACFAAAHPGYAFH
PLVAALPSYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSVSKTEASSVSS
VSPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcagtggggccctcaaaggtttgcaggtgggcagccacagaccagctttgag
gacagcacccaggggagcgtcttcacctacaccaacagcaactccaccagagaccccttc
gacggccccaattaccacatcgcccccagatgggtgtaccacctgaccagcgtctggatg
gtcttcgtgctcatcgcctccatcttcacgaacgggcccgtgctggcagccaccgtgaag
ttcaagaagctgcgccaccctctgaactggatgctggtgaacttggccgtcgctgacctg
gcggagacggtcattgccagcaccatcagcgttgtgaaccagatgtacggctactttgtg
ctgggccaccccttgtgcattgtggagggcttcactgtctccttgtgtgggatcaccggt
ctctggtccttggccatcatttcctgggagaggtggatggtggtctgcaagccctttggc
aacgtgagatttgatgccaagttggccattgcgggcattgccttctcctggatctgggct
gctgtgtggacagctccacccatctttggttggagcaggtactggccccacggcctgaag
acgtcgtgcggcccggacgtgttcagcggcagctcttaccctggggtgcagtcttacatg
atcgcgctcatgatcacctgctgcttcatcccgctcagcgttatcgtgctctgctacctg
caagtgtggctggccgtccgagcggtggcgaagcagcagaaagaatccgaatccacccgg
aaggcggagaaggaggtaacccgcatggtgatggtgatgatctttgcgtactgcctctgc
tgggggccctacacattctttgcatgcttcgccgctgcccaccctggctacgccttccac
cctctggtggccgccctgccatcctacttcgccaaaagtgccaccatctacaaccccatt
atctacgtctttatgaaccggcagtttcgaaactgcatcttgcagctttttgggaagaag
gtggatgatagctctgaactctccagcgtttccaaaacagaggcctcatctgtctcttcg
gtgtcacctgcctga
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