Phocoena sinus (vaquita): 116747646
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Entry
116747646 CDS
T07759
Name
(RefSeq) nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03008
Ribosome biogenesis in eukaryotes
psiu03013
Nucleocytoplasmic transport
psiu03015
mRNA surveillance pathway
psiu05014
Amyotrophic lateral sclerosis
psiu05164
Influenza A
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116747646
03015 mRNA surveillance pathway
116747646
03008 Ribosome biogenesis in eukaryotes
116747646
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116747646
05168 Herpes simplex virus 1 infection
116747646
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116747646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747646
03009 Ribosome biogenesis [BR:
psiu03009
]
116747646
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116747646
mRNA cycle factors
Stress granule specific factors
116747646
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116747646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
Motif
Other DBs
NCBI-GeneID:
116747646
NCBI-ProteinID:
XP_032475990
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All DBs
Position
X:87177913..87184580
Genome browser
AA seq
440 aa
AA seq
DB search
MERNRQDETLGSWFKIRIPFGIKYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFVENA
NIAFALKNVNGKIYNEANERISIFVDPCDAPHSVLKELRSEKVEQIKLPVKEQYDASQQS
LDIQRVRSDPDLMTPDTGMARNPRNDMATSLQIHPGNMPKVKSAGEMDKGERLEPEGMCA
DRNPLCTTFPDMSTNISSILELFPKLLTLDDQETSPLAKCGIEACKRLPTCKGSYFGSDE
LKSLVLQFLKQYYLIHDYGDRQVLAGAYHEEACFSLTIPFHPEDPAPSSLCEYFKDSRNM
KKLKDPHLRVQLLKHTKRVIVHTLCVLPKTQHDFSSFVVDTWFQTETMLCFSVSGVFKEV
EGRSQGCVRAFTRTFIATPARYASLCIMNDELFVRDADPSETQSVFSIPLPTPTSSSMHP
LSQQQQDIMQASSTPSEMNR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaacaggcaggatgagaccttggggagctggttcaagatcagaattcccttc
ggtattaaatatgatgagaagtggctgctgaatttgattcagaagcaatgcagtgtcccc
ttcaccccagtcgaatttcactatgagaaaatgcaggcccagttcttcgttgagaatgcc
aacattgccttcgcactgaagaatgtcaacggcaagatttacaatgaggctaatgaaagg
atatctatctttgttgatccctgtgatgcaccccactctgtgctgaaggagctgaggtca
gaaaaggtggagcagataaagctgcccgtgaaggaacaatatgatgcctcccagcaatct
cttgacatccagagagtccgctctgaccctgacttgatgacccctgatactggaatggca
cgaaaccctagaaatgacatggccacctccctgcagatccatccagggaatatgcccaag
gtgaagtctgcaggggagatggacaagggtgagcggctggagccagaagggatgtgtgca
gacagaaaccccctgtgcaccaccttccctgatatgtcaaccaacataagctccatcctg
gaattgttccccaagttactaaccttggatgaccaggagacatccccactggctaagtgt
ggtattgaagcctgcaagcgcttaccaacctgcaagggaagctactttggttctgatgag
ctgaaaagcctagtcctgcaattcctgaagcagtactacttgatccatgactatggagac
agacaggttctcgcgggtgcttatcacgaggaggcctgcttctccctgacgattcccttc
caccccgaggacccagccccaagcagcttgtgcgagtatttcaaggacagcaggaatatg
aagaagctcaaggacccccacctgcgggtccagctgctgaagcacacaaaacgtgtcatt
gtgcacactctctgtgtgttgcccaagactcagcatgacttcagctccttcgtggtggac
acgtggttccagacggaaacgatgctctgcttctccgtcagcggggtgttcaaggaagtg
gaaggacgttctcagggctgtgtgcgtgccttcacccggaccttcatcgctacccctgcc
cgctacgccagtctgtgcatcatgaatgacgagctgtttgtgagggatgccgaccccagt
gagacccagagtgtgttctccatcccactgcctacacccacctccagctccatgcacccc
ctctcccagcagcagcaggacatcatgcaggcatcctccaccccatctgagatgaaccgc
tag
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