Phocoena sinus (vaquita): 116747655
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Entry
116747655 CDS
T07759
Name
(RefSeq) nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03008
Ribosome biogenesis in eukaryotes
psiu03013
Nucleocytoplasmic transport
psiu03015
mRNA surveillance pathway
psiu05014
Amyotrophic lateral sclerosis
psiu05164
Influenza A
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116747655
03015 mRNA surveillance pathway
116747655
03008 Ribosome biogenesis in eukaryotes
116747655
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116747655
05168 Herpes simplex virus 1 infection
116747655
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116747655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747655
03009 Ribosome biogenesis [BR:
psiu03009
]
116747655
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116747655
mRNA cycle factors
Stress granule specific factors
116747655
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116747655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
Motif
Other DBs
NCBI-GeneID:
116747655
NCBI-ProteinID:
XP_032476000
Ensembl:
ENSPSNG00000015091
LinkDB
All DBs
Position
X:complement(88036960..88043626)
Genome browser
AA seq
440 aa
AA seq
DB search
MERNRQDETLGSWFKIRIPFGIKYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFVENA
NIAFALKNVNGKIYNEANERISIFVDPCDAPHSVLKELRSEKVEQIKLPVKEQYDASQQS
LDIQRVRSDPDLMTPDTGMARNPRNDMATSLQIHPGNMPKVKSAGEMDKGERLEPEGMCA
DRNPLCTTFPDMSTNISSILELFPKLLTLDDQETSALAKCGIEACKRLPTCKGSYFGSDE
LKSLVLQFLKQYYLIHDYGDRQVLAGAYHEEACFSLTIPFHPEDPAPSSLCEYFKDSRNM
KKLKDPHLRVQLLKHTKRVIVHTLCVLPKTQHDFSSFVVDTWFQTETMLCFSVSGVFKEV
EGSSQGCVRAFTRTFIATPAGYASLCILNDELFVRDADPSETQSVFFIPLSAPTSSSMHP
LSQQQQDIMQASSTPSEMNR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaacaggcaggatgagaccttggggagctggttcaagatcagaattcccttc
ggtattaaatatgatgagaagtggctgctgaatttgattcagaagcaatgcagtgtcccc
ttcaccccagtcgaatttcactatgagaaaatgcaggcccagttcttcgttgagaatgcc
aacattgccttcgcactgaagaatgtcaacggcaagatttacaatgaggctaatgaaagg
atatctatctttgttgatccctgtgatgcaccccactctgtgctgaaggagctgaggtca
gaaaaggtggagcagataaagctgcccgtgaaggaacaatatgatgcctcccagcaatct
cttgacatccagagagtccgctctgaccctgacttgatgacccctgatactggaatggca
cgaaaccctagaaatgacatggccacctccctgcagatccatccagggaatatgcccaag
gtgaagtctgcaggggagatggacaagggtgagcggctggagccagaagggatgtgtgca
gacagaaaccccctgtgcaccaccttccctgatatgtcaaccaacataagctccatcctg
gaattgttccccaagttactaaccttggatgaccaggagacatccgcactggctaagtgt
ggtattgaagcctgcaagcgcttaccaacctgcaagggaagctactttggttctgatgag
ctgaaaagcctagtcctgcaattcctgaagcagtactacttgatccatgactatggagac
agacaggttctcgcgggtgcttatcacgaggaggcctgcttctccctgacgattcccttc
caccccgaggacccagccccaagcagcttgtgcgagtatttcaaggacagcaggaatatg
aagaagctcaaggacccccacctgcgggtccagctgctgaagcacacaaaacgtgtcatt
gtgcacactctctgtgtgttgcccaagactcagcatgacttcagctccttcgtggtggac
acgtggttccagacggaaacaatgctctgcttctccgtcagcggggtgttcaaggaagtg
gaaggaagttctcagggctgtgtgcgtgccttcacccggaccttcatcgctacccctgcc
ggctacgccagtctgtgcatattgaatgacgagctgtttgtgagggatgccgaccccagt
gagacccagagtgtgttcttcatcccactgtctgcacccacctccagctccatgcaccct
ctctcccagcagcagcaggacatcatgcaggcatcctccaccccatctgagatgaaccgc
tag
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