KEGG   Phocoena sinus (vaquita): 116747750
Entry
116747750         CDS       T07759                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03410  Base excision repair
psiu04140  Autophagy - animal
psiu04217  Necroptosis
psiu04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116747750
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116747750
  09143 Cell growth and death
   04217 Necroptosis
    116747750
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    116747750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116747750
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116747750
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116747750
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    116747750
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116747750
   MMR (mismatch excision repair)
    Other MMR factors
     116747750
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   116747750
SSDB
Motif
Pfam: HMG_box_2 HMG_box
Other DBs
NCBI-GeneID: 116747750
NCBI-ProteinID: XP_032476169
LinkDB
Position
X:complement(4766801..4769688)
AA seq 143 aa
MGKGDPKKPRGEMSSYAFFVQTCRQEHKRKHPDASVNFSEFSKKCSERWKTTSAKEKGKF
EDMAKADKARYEREMRTYIPPKGETEKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWKNTAADDKQP
NT seq 432 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcgaaatgtcatcatatgcattctttgtg
caaacttgccggcaggagcacaagaggaagcacccagatgcttccgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccacgtctgctaaagagaaaggaaagttt
gaagacatggcaaaagcggacaaggcccgttatgaaagagaaatgagaacttatatccct
cctaaaggggaaacagaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcgtttttcttgttttgttctgagtatcgtccaaaaatcaaaggagagcatcctggccta
tccatcggcgatgttgcaaagaaactgggagagatgtggaaaaacactgctgcagatgac
aagcagccttag

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