Phocoena sinus (vaquita): 116747809
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Entry
116747809 CDS
T07759
Symbol
GABRE
Name
(RefSeq) gamma-aminobutyric acid receptor subunit epsilon
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04519
Cadherin signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04727
GABAergic synapse
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116747809 (GABRE)
04082 Neuroactive ligand signaling
116747809 (GABRE)
04519 Cadherin signaling
116747809 (GABRE)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116747809 (GABRE)
04723 Retrograde endocannabinoid signaling
116747809 (GABRE)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116747809 (GABRE)
05033 Nicotine addiction
116747809 (GABRE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116747809 (GABRE)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116747809 (GABRE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
C5-epim_C
Motif
Other DBs
NCBI-GeneID:
116747809
NCBI-ProteinID:
XP_032476241
Ensembl:
ENSPSNG00000015863
LinkDB
All DBs
Position
X:complement(128206695..128224096)
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AA seq
502 aa
AA seq
DB search
MLTKVLLILLGTFIILPSRIEGPHVESEKGPSASDDDVYGPKPQAPDKELPPEEIKPTAT
DTHDRLGKMPTATEILDGILNNYDYKLRPGIGERPTVVTVELSVNTLGPISILDMEYTID
ITFYQTWYDERLRFNGSFESFVLNGNLVSLLWIPDTFFRNSKRTQEHSITMPNQMVRIHK
DGKVLYTIRMTIDAGCSLHMLKFPMDSHSCPLSFSSFSYPENEIIYKWENFKLEINESNS
WKLFQFDFIGVSNTTETITTVAGDYIVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISF
WIKKDCAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFIFCFCALMEFA
VLNFLTYNRTASRGSPKLRHPRAHARDPTPSRVRVIEHPEAFVCDIEDPEEEEESEEEES
EEEEGPSCPARQSVRPGSTPRPGGCCKWCEKYCCTVPTCEGSTWQQGRLFIHVYRLDNYS
RVIFPVTFFFFNVLYWLVCLNL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaagttctcctgatcctactgggcacgttcataatccttccgtcgaggatt
gaaggacctcatgttgaatcagagaagggaccctctgccagtgatgatgatgtctatggc
cccaaaccccaggctcctgataaggaactcccccctgaagaaataaagcccactgctact
gatacccatgacagacttggcaaaatgccaacagccactgaaatcctggatggtatcttg
aataactatgactacaaactgcgccctggcattggcgagaggcccactgtggtcactgtc
gagctctctgtcaacacccttgggcctatctctatcctggacatggaatacaccattgac
atcaccttctaccagacttggtatgatgaacgccttcgtttcaatggcagctttgaaagc
tttgttctgaatggcaacttggtgagcctgttatggatcccagacaccttttttaggaat
tctaagaggacccaagagcattcgatcaccatgcccaaccagatggtccgcatccacaag
gatggcaaggtgttgtacacaatcaggatgaccattgatgctggctgctcactccacatg
ctcaaatttccaatggattctcactcttgccctctgtctttctctagcttttcatatcct
gagaatgagatcatctacaagtgggaaaatttcaagcttgaaatcaatgaaagtaattcc
tggaagctcttccagtttgattttataggagtgagcaacacgactgaaactatcacaacc
gtagctggcgattacatagtcatgacgcttttcttcaacgtgagcaggaggtttggcttt
gtggcctttcaaaactatgttccttcttctgtgaccacgatgatctcctggatttccttt
tggatcaagaaagactgtgctccggccaggacttctttagggatcacttctgtactcacc
atgaccactttgggcaccttttcccggaagaatttcccacgtgtctcctatatcacagcc
ttggatttctatattgcgatctgcttcatcttctgcttctgtgctctgatggagtttgct
gtgctcaacttcctgacctacaaccggacagcgtcccgtggttctccgaaacttcgccat
cctcgtgcccatgcacgtgacccaaccccttcccgtgtccgtgtcatcgagcatccggaa
gcttttgtgtgcgacattgaggaccccgaggaggaggaggaaagtgaggaagaggagagt
gaggaagaggagggcccatcttgcccagcccggcagtccgtcaggccaggcagcacccct
cgccctggtggctgttgcaagtggtgcgagaagtactgctgcacagtccccacttgtgag
ggcagcacctggcagcagggccgcctcttcatccatgtctaccgccttgataactactcg
cgagtgattttcccagtcaccttctttttcttcaatgtgctctactggcttgtttgcctt
aacctgtag
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