KEGG   Phocoena sinus (vaquita): 116747852
Entry
116747852         CDS       T07759                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03420  Nucleotide excision repair
psiu04120  Ubiquitin mediated proteolysis
psiu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116747852 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116747852 (CUL4B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    116747852 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psiu04121]
    116747852 (CUL4B)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116747852 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116747852 (CUL4B)
Ubiquitin system [BR:psiu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     116747852 (CUL4B)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      116747852 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      116747852 (CUL4B)
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116747852 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 116747852
NCBI-ProteinID: XP_032476318
Ensembl: ENSPSNG00000017563
LinkDB
Position
X:complement(102397872..102432934)
AA seq 904 aa
MKSVCSVTSGFSSPNPSAAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSGSNSSN
EREDFDSTSPSSSTPLQPRDSASPSTSSFSCLGVSVAAPSHVPIQKKLRFEDTLEFVGFD
AKMAEESSSSSSSSSPTAATSQQQQLKNKSILISSVASVHHANGLAKSSTTVSSFANSKP
GSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK
ISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLD
RTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSL
LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITY
LDQTTQKSLIATVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL
QQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETF
INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL
AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQVKYMQNQ
NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGH
CVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGK
ARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQ
IDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQY
NYIA
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgaaaagtgtctgctcagtcacttccggtttttcttcccccaatccctcagctgctgct
gctgctgctcaggaggtcagatctgccactgatggtaataccagcaccactccgcccacc
tctgccaagaagagaaagttaaacagcagcagcagcagcagcggcagtaacagtagtaac
gagagagaagactttgattccacctctccctcctcttccactcctttacaacccagggat
tcggcatccccttcaacctcgtccttctcctgcctgggggtttcagtggctgctcccagc
cacgtaccgatacagaagaagctgcgttttgaagacaccctggagtttgtagggtttgat
gcgaagatggctgaggaatcctcctcctcctcctcctcatcttcaccaactgctgcaaca
tctcagcagcagcaacttaaaaataagagtatattaatctcttctgtggcttcggtgcat
cacgcaaacggcctagccaaatcttctaccaccgtctctagctttgctaacagcaagcct
ggctctgctaagaagttagtgatcaagaattttaaagataagcctaaattaccagaaaac
tacacagatgaaacatggcagaaactgaaagaagcagtggaagctatccagaatagtact
tcgattaagtacaatttagaagaactctatcaggctgtggaaaatctctgttcttacaag
atttctgcaaacttgtacaaacagctgagacagatttgtgaagatcacatcaaagcacaa
attcatcagttcagagaggattcattggatagtgttctttttctaaagaagatcgataga
tgttggcagaaccattgcagacagatgatcatgatcaggagcatttttttgtttctggat
aggacttacgttcttcaaaattcaatgctaccctccatttgggatatgggactggagtta
tttagggctcatattataagtgatcaaaaagtccagaataagacaattgatggcattctt
cttttgattgagagggaaaggaatggtgaagcaattgacagaagtttactgagaagcctt
ttaagcatgctctctgatttgcaaatttatcaggattcttttgaacaacgatttttggaa
gaaactaaccgactttacgcagccgaaggccaaaaattaatgcaggaaagagaggttcct
gaatatcttcatcatgttaacaaacgtctagaagaagaagcagacagacttattacttac
ttagatcagaccacccaaaagtcattaattgctactgtggaaaaacaacttctaggtgaa
cacttaacagcaattcttcagaaaggtttaaatagcctccttgatgaaaaccgaattcaa
gatttatctctcctgtatcagctcttcagtagagttcgaggtggcgttcaggttctcttg
cagcaatggattgaatacattaaggcatttggtagcactattgtaattaatcccgaaaag
gataagaccatggttcaagaattgctggattttaaagataaggttgaccatataattgat
atctgtttcctgaagaatgaaaaatttatcaacgccatgaaagaagcatttgaaacattc
attaacaaaagaccaaacaaacctgctgaacttatagctaagtatgtagattcaaagctt
cgcgcaggcaacaaagaagctacagatgaagaacttgagaaaatgttggataagattatg
attatatttagatttatctatggcaaggatgtttttgaggccttctataagaaagattta
gccaagcgcctgttagttgggaagagcgcatctgtggatgctgaaaaatcaatgctgtcc
aaacttaaacatgaatgtggagctgctttcaccagcaaacttgaaggaatgtttaaagac
atggaactttctaaagacatcatgattcagttcaaacaggtaaaatatatgcagaaccag
aatgtacctgggaatattgaattaactgtgaatatcctgacgatgggttattggccaaca
tatgtgcctatggaagttcatttaccaccagagatggtaaaacttcaggagattttcaag
accttttacctaggcaaacatagtggcaggaaacttcagtggcagtcaaccctaggacac
tgtgtgctaaaggcagaatttaaagagggtaaaaaggaactccaggtctctctttttcaa
acactggtgctgctaatgtttaatgagggagaagagttcagtttggaagagatcaagcag
gctaccggaatagaggatggggagttaagaagaacactgcagtcattggcttgtggcaaa
gctagagttctggcgaaaaatccaaagggtaaagatattgaagatggtgacaagttcatt
tgtaatgatgatttcaagcacaaacttttcaggataaagatcaatcaaattcagatgaaa
gaaacggttgaggaacaagcaagcaccacagaaagagtatttcaagacagacagtatcaa
attgatgctgcaattgttcgaattatgaagatgagaaagacacttagccacaatctcctt
gtttcagaagtgtacaaccagttgaaatttccagtaaagcctgctgatcttaagaagaga
atagaatccttaattgaccgggactacatggaaagagataaagaaaatccaaaccagtac
aattatattgcataa

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