Phocoena sinus (vaquita): 116747876
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Entry
116747876 CDS
T07759
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116747876 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747876 (CSTF2)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116747876 (CSTF2)
U7-dependent histone pre-mRNA processing factors
116747876 (CSTF2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116747876
NCBI-ProteinID:
XP_032476387
Ensembl:
ENSPSNG00000018910
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All DBs
Position
X:85835994..85861543
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AA seq
599 aa
AA seq
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MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQTVHSAGPGSGSNVSMNQQNPQAPQAQSLSGMHVN
GAPPLMQASLQAGVAAPGQIPATVTGPGPGSLAPGAYIVPLRKTELLLRGKDQTRTYGGM
QAQVGMPGSGPVSMERGQVPMQDPRAAMQRGPLPANVPTPRGLLGDAPNDPRGGTLLSVT
GEVEPRGYLGPPHQGPPMHHVPGHDSRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPP
LDGRGGRDPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVR
GMEARSMDTRGPVPGPRGPIPSGIQGPSPINMGTVGPQGSRQVPVMQGAGMQGASIQGGG
QPGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgtgagagaccctgcggtggatcgttctctacgttcggtgttcgtg
gggaacattccatatgaggctactgaagagcaattaaaggacatcttttctgaggttgga
cctgttgttagtttcaggttggtatatgatagggagacaggaaagccaaaaggttatggc
ttctgtgaataccaagaccaggagacagcacttagtgccatgcgaaacctaaatgggcgc
gaattcagtgggagagcacttcgagtggacaatgctgccagcgaaaagaacaaagaagag
ttgaagagccttggcactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctctgtgtccagaatagtcctcaggaagcacggaac
atgttgcttcagaaccctcaactggcttatgctttgctacaagcccaggtagtgatgaga
attgtggatccagaaattgccttgaaaattctgcatcgccagacaaatatcccaacactg
attgcaggcaaccctcagacagtccacagcgccggacctggctcaggatccaatgtgtcg
atgaaccagcagaatcctcaggcccctcaggcccagtctttgagtggaatgcatgtcaat
ggcgcacctcctctgatgcaagcttctctacaggctggagttgcagcaccagggcagata
ccagccactgtaacaggacctgggcctggttccttagctcctggagcatatattgttcct
ttgaggaaaacagaattattgctacgtgggaaggaccagacaaggacttatggaggaatg
caggcccaggttggaatgccaggaagtggaccagtgtccatggagcggggacaagtgccg
atgcaagaccccagagcagctatgcagcgtgggcccttgcctgccaacgtcccaactcct
cgaggtctgttgggagatgctccaaatgacccacgcggaggcactttactttctgtaact
ggagaggtagagcctagaggttacctgggaccacctcatcagggtccgcccatgcaccat
gtccctggccatgacagccgtggcccacccccacatgagatgcgaggagggccattagct
gagcccagaccgctaatggcagagccaagaggacccatgctagatcagaggggtccacca
ttggatggcagaggtggaagagatccccgaggcatagatgcacgagggatggaggcacga
gccatggaggcaagaggattagatgctagaggattggaagcccgtgcgatggaggcccgt
gcaatggaggctcgtgcaatggaggcccgtgcaatggaggcccgtgcaatggaagtcaga
ggaatggaggccagaagcatggatacaaggggcccagtcccaggccctagaggccctata
cctagtggaatccagggtcccagtccaattaacatggggacagttggcccccagggatcc
agacaggtcccagtcatgcagggagcgggcatgcaaggagcgagcattcagggtggaggc
cagcctggtggctttagtcctggccagaaccaagtcactccacaggaccatgagaaggct
gctttgatcatgcaggttcttcaactaactgcagaccagatcgccatgctgcctcctgag
cagaggcagagtatcctgatcttaaaggaacaaatacagaaatctactggagcgccttaa
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