Phocoena sinus (vaquita): 116747893
Help
Entry
116747893 CDS
T07759
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116747893 (AFF2)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116747893 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
116747893
NCBI-ProteinID:
XP_032476417
Ensembl:
ENSPSNG00000017260
LinkDB
All DBs
Position
X:125389445..125885058
Genome browser
AA seq
1307 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKREWERRNQEVQQEDDLFSSGFDLFGEPYKVAEY
TNKGDALANRVQNTLGNYDEMKDLLTNHSNQNHLVGIPKNSVPQTPINKNEPSFFPEQKN
RMITPHQDSTHSSAPMPPPSVVILNSTLIHSNRKSKPDWPRDSQNASMVPASQAGSQPSK
TQPSTQDQPPARLEDFFVYPAEQPQVGAAEESNPPAKEDGNLKSSGGDTFKEIFQSSSPE
ESEFTLQAPGSPLVASSLLAPSSGLVVQNFPPGVYCKTSVGQQKPTAYVRPMDGQDQAPD
ISPTLKPSIEFENSFGNLSFGSLLDGKPSAPSSKTKLPKFTILQTSEVSLPSDPSCVEEI
LREMTHPWPTPLTAMHTSGNSEQSTFSIPGQESQHLTPGFALQKWSDPTSRASTKMLEDD
LKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKSKNNPVNPLLATPQPTPAAPASGGSGS
SSDSESSSESDSDTESSTTDSEANEAPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFIC
GQNETPMETISVPPPIIQPMEVQVKVKANPSQVPAEPKERPLLSLIREKARPRPTPKIPE
TKALKHKLSTTLETASQRTIGKKQPKRVEKNPSIEEFTWPKPNISSSTPKEKESMELPEP
PRGRSKATAHKPVPRKEPRPSIPLAAEKKKYRGPGKIVPKSREFIETDSSTSDSSTDQEE
TLQIKVLPPCMAPGGNAAKSKDTCGASLTLSTFSSINPPVPSEEPAFPPIPVGQTELLSP
LRDHLSPPRSENLKNLWVKIDLDLLSRVPGHSSLQAAPAKPDHKETAAKPRRQAAAPAAA
DKAAPKGKRKHKPTEVVEKIPEKKQRLEEAATICLLPPCISPAPPQKPPSTKENNSSRRA
NRRKEEKLFPPPLSPLPEDPPRRRNVSGNNGPFSQDKTIPVIGQITSNKPKRSEGKFCAT
FKGISVNEGDTPKKAASATVTVTNTAVATATVTATAIVTATVTATATATATTTTTTTTIS
TITSTITTGLMDSSHLEMTSWAALPVLSSSTTNVRRPKLTFDDSVHNADYYMQEAKKLKH
KADALFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFA
SPLASDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWV
GNGKNTPSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMAD
KLTRENKEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggacttggagcagcagtgtcactatgaacaa
gaccgtagtgcacttaagaaaagggaatgggagcggagaaatcaagaagtccagcaagaa
gacgatctcttttcttcaggctttgatctttttggggagccctacaaggtagctgaatat
acaaacaaaggtgatgcacttgccaaccgagtccagaacacgctgggaaactatgatgaa
atgaaggatttgttaactaaccattctaatcagaatcatctagtgggaatcccaaagaat
tccgtgccccagactcccatcaacaaaaatgaaccaagcttttttccagaacaaaagaac
cgaatgatcacacctcatcaggatagcactcactcctcggcgccaatgcctccaccttct
gttgtgatactgaattcaaccctaatacacagcaaccggaagtcaaaacctgactggcca
cgagatagtcagaacgctagcatggtaccggccagccaggctggtagtcagcccagcaag
acgcagccatcaacacaggaccagccccctgccagactggaagacttcttcgtctaccca
gctgaacagcctcaagttggagcagctgaagagtcaaacccacccgcaaaggaagacggt
aacctcaagtccagtggaggggatacgttcaaagaaatctttcagtccagctcaccagaa
gaatctgagtttacactgcaggcgcctgggtctcccctagttgcctcctctttattagct
cccagcagtggccttgtggttcaaaacttcccacccggggtttactgcaaaacaagcgtg
gggcagcaaaaaccaaccgcatatgtcagacccatggatggtcaggaccaagccccggac
atctctcccacgctgaaaccttcaattgaattcgagaacagctttgggaatctgtcattt
gggtcactcttggatggcaaacccagtgcacccagttcaaagactaaactgccaaagttc
accattctccaaacaagtgaagtgagccttcccagtgacccaagctgtgttgaagaaatc
ttgcgggagatgacccatccctggcctactcctctcactgccatgcatacttctggaaac
tctgagcagagcacattttccatcccaggacaggaatcccagcatctgaccccaggattc
gccttacaaaagtggagcgacccgaccagcagagcttctacaaagatgcttgaagacgac
cttaagctgagcagcgatgaagatgaccttgaacccgtgaagaccttgaccactcagtgc
actgccactgagctctaccaggctgttgaaaaggcaaaatctaagaataatcctgtaaac
ccgctcttggccacgcctcagcccacacctgcagcgccagccagcgggggatccggcagc
tccagtgactctgagagcagctcagagtcagactcagacactgaaagcagcaccaccgac
agtgaagccaatgaggcgccgcgcgtggccacgccagagcctgagccgccctccaccaac
aagtggcagctggacaaatggctgaacaaagtgacatctcagaacaagtcgtttatttgc
ggccaaaatgaaacacccatggagacgatctctgtacctcctccaatcatacagccaatg
gaagtccaggtcaaggtgaaggcaaaccccagccaggtcccggctgaacccaaagagagg
cctctcctcagtctcatcagggagaaagcccgtccacggcccacccccaaaattccagaa
acaaaggctctgaagcataaattgtcgacaactctcgagacagcatctcaaaggacaatt
gggaaaaaacagcccaagagggtcgagaagaaccccagcattgaggaatttacctggccc
aaaccaaatatctccagcagcactcccaaagaaaaggaaagcatggagcttcctgagccc
ccgagaggccgcagcaaagccaccgcccacaagccggtccctaggaaagaaccgaggccc
agcatccccttggctgccgagaagaagaagtaccgagggcctggcaagatcgtgccgaag
tcccgggaattcattgaaaccgactcgtctacgtctgattccagcacagatcaggaggag
accctgcagatcaaagtcctgcctccttgcatggctcctgggggcaacgctgccaagtcc
aaggacacctgcggggccagcctgaccctcagcaccttcagcagcatcaacccgcccgtc
cccagtgaggagcctgcttttccacccatccctgtcgggcaaaccgagcttctgtctcct
ctccgagatcacctctcccctccgagatccgagaatctgaaaaatctctgggtgaagatt
gacctcgacctactgtctcgagtgcctggccacagctcactgcaggcggcgccggccaag
ccagaccacaaggagacagccgcaaagcccaggcggcaggcagctgccccggctgctgcg
gataaagccgcccccaagggcaagcgtaagcacaagccaacagaagttgtggagaaaatc
cctgagaagaagcaacgcctggaggaggcggccaccatctgcctgctaccaccttgcatc
tcaccagctcccccccagaaacctcccagcactaaagaaaataattcatccaggagagca
aacagaagaaaagaagaaaagctgtttccccctccactttccccactgccagaggatcct
ccgcgccgcaggaatgtcagtggcaataatggtcccttcagtcaagacaagaccatccct
gtgattggacagatcacctcgaacaaacctaagaggagtgaaggcaaattctgtgctact
ttcaaagggatatctgtaaatgagggagacactccaaaaaaggcagcctctgccaccgtc
actgtcaccaacactgctgttgccactgccactgtcactgctactgccattgtcaccgcc
actgtcacggccactgccacggccactgccactaccaccaccactaccactaccatttcc
accatcacctccaccatcactactggcctcatggacagcagtcacctggagatgacatcc
tgggcggccctgcccgttctttccagcagcactaccaatgtccggagacccaagctcact
tttgatgactcggttcacaacgctgattattacatgcaagaggcgaagaagctgaagcac
aaagctgacgccctgtttgagaaatttggcaaagccgtgaattatgccgatgcagccctg
tccttcaccgaatgtggcaacgcgatggagcgcgaccctctggaagccaagtctccgtac
accatgtactctgagaccgtggagcttctcaggtatgcaatgaggctgaagaactttgca
agtcccctggcttcggatggggacaaaaagctggccgtactatgctaccgatgcttgtcc
cttctctacctgcggatgttcaaactgaagaaggaccacgccatgaagtactccagatca
ctgatggaatattttaagcaaaatgcttcaaaagtcgctcagataccatctccatgggta
ggcaatggaaaaaacactccatccccagtgtctctcaacaacgtgtctcccatcaacgca
atggggaactgtaacaacggcccggtcaccatcccccagcgcattcaccacatggccgcc
agccacgtcaacatcactagcaacgtgttacggggctacgaacactgggacatggccgac
aaactgacaagagagaataaagaattctttggcgatctggacacgttgatggggcccctg
acccagcacagcagtatgaccaatctcgtccgctacgttcgccagggactgtgttggctg
cgcatcgacgcccatttgttgtag
DBGET
integrated database retrieval system
