Phocoena sinus (vaquita): 116748075
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Entry
116748075 CDS
T07759
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116748075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116748075
03041 Spliceosome [BR:
psiu03041
]
116748075
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116748075
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116748075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
KIF21A
OVT1
UPF0193
Zw10_N
COG6_N
Terpene_synth_C
UPF0242
Sec8_N
DUF1664
COG3_N
Laminin_II
DUF6899
ZapD
DUF4110
DUF3450
Motif
Other DBs
NCBI-GeneID:
116748075
NCBI-ProteinID:
XP_032476799
Ensembl:
ENSPSNG00000014880
UniProt:
A0A8C9CD99
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Position
X:complement(59530575..59531205)
Genome browser
AA seq
201 aa
AA seq
DB search
MTDDEVIRKRLLIDGDGAGDDERINQLVKSFIKWCYSGSQEEGYSQYQQMLSTLSQCELS
MGKTLLVYDMNLREVENYEKTYKEIEGNIAGAHETIAECKKQILQAKQTRKNLQECDALA
KAIQRYPDRHETLKEIEALGKELEHLSRVKQSVEDKLELRRKQFHVLFTTIHELQQALEN
DEKLSEVEEAQETSMGTDPKP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgaagtcatacggaagcgtctcctaattgacggagatggtgctggagat
gatgagagaattaatcagctcgtgaaaagtttcattaaatggtgctactctggatcccag
gaagagggatacagccagtaccaacaaatgctgagcacactgtcccaatgtgaactttca
atgggcaaaactttgctggtatatgatatgaatctcagagaagtggaaaattacgaaaaa
acttacaaagaaatagaaggtaacattgctggagcacatgaaacaattgctgagtgcaaa
aagcaaattcttcaagcaaaacaaacacgaaaaaatctccaagaatgtgatgcattggca
aaagcgatccagcgttatccagacaggcatgagacattaaaggaaatagaggctctggga
aaagaattagagcatctttcacgtgttaaacaaagtgttgaagataagctagaattgaga
agaaaacagtttcacgttctttttactaccatccacgaacttcagcaagcactggaaaat
gatgaaaagctctcagaggtagaagaagctcaagaaacaagcatgggaactgatcctaaa
ccatag
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