KEGG   Phocoena sinus (vaquita): 116748075
Entry
116748075         CDS       T07759                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116748075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116748075
   03041 Spliceosome [BR:psiu03041]
    116748075
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     116748075
Spliceosome [BR:psiu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116748075
SSDB
Motif
Pfam: THOC7 KIF21A OVT1 UPF0193 Zw10_N COG6_N Terpene_synth_C UPF0242 Sec8_N DUF1664 COG3_N Laminin_II DUF6899 ZapD DUF4110 DUF3450
Other DBs
NCBI-GeneID: 116748075
NCBI-ProteinID: XP_032476799
Ensembl: ENSPSNG00000014880
UniProt: A0A8C9CD99
LinkDB
Position
X:complement(59530575..59531205)
AA seq 201 aa
MTDDEVIRKRLLIDGDGAGDDERINQLVKSFIKWCYSGSQEEGYSQYQQMLSTLSQCELS
MGKTLLVYDMNLREVENYEKTYKEIEGNIAGAHETIAECKKQILQAKQTRKNLQECDALA
KAIQRYPDRHETLKEIEALGKELEHLSRVKQSVEDKLELRRKQFHVLFTTIHELQQALEN
DEKLSEVEEAQETSMGTDPKP
NT seq 606 nt   +upstreamnt  +downstreamnt
atgactgacgacgaagtcatacggaagcgtctcctaattgacggagatggtgctggagat
gatgagagaattaatcagctcgtgaaaagtttcattaaatggtgctactctggatcccag
gaagagggatacagccagtaccaacaaatgctgagcacactgtcccaatgtgaactttca
atgggcaaaactttgctggtatatgatatgaatctcagagaagtggaaaattacgaaaaa
acttacaaagaaatagaaggtaacattgctggagcacatgaaacaattgctgagtgcaaa
aagcaaattcttcaagcaaaacaaacacgaaaaaatctccaagaatgtgatgcattggca
aaagcgatccagcgttatccagacaggcatgagacattaaaggaaatagaggctctggga
aaagaattagagcatctttcacgtgttaaacaaagtgttgaagataagctagaattgaga
agaaaacagtttcacgttctttttactaccatccacgaacttcagcaagcactggaaaat
gatgaaaagctctcagaggtagaagaagctcaagaaacaagcatgggaactgatcctaaa
ccatag

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