Phocoena sinus (vaquita): 116748144
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Entry
116748144 CDS
T07759
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116748144 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116748144 (USP9X)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116748144 (USP9X)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116748144 (USP9X)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116748144 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
116748144
NCBI-ProteinID:
XP_032476913
Ensembl:
ENSPSNG00000013676
UniProt:
A0A8C9CD56
LinkDB
All DBs
Position
X:36737027..36863367
Genome browser
AA seq
2570 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQVDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNP
HCKFHIYNGTRPCESVSSNVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRLGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
SNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQGRQVD
DLDVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPADDRKLIGQLNLKDKSL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNPMASVNQVTHDQAVVLQS
ALQSIPNPSSECMLRNVSIRLAQQISDEASRYMPDICVIRAIQKIIWASGCGALQLVFSP
NEEITKIYEKTNAGNEPDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINIPNAEVLLNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLRYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PQQFEEKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSDSEPTGS
TKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQC
FGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQGDELIRYISELAITTRPHQ
IIMPSAIERSVRKQNVQFMHNRMQYSMEYFQFMKKLLTCNGVYLNPPPGQDHLLPEAEEI
TMISIQLAARFLFTTGFHTKKVVRGSASDWYDALCILLRHSKNVRFWFAHSVLFNVSNRF
SEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAV
LNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGPPIKY
QYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNVADILF
VRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLL
LQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPV
AYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERS
HSARMTLAKACELCPEEVKKAASVQQIEMEESKEPDDQDAPDEHESPPPEDAPLYPHSPG
SQYQQNNHVHGQPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7713 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagtaggagggaatgacagccagggccaggctcct
gatggacagtctcagccccccctccaacagaatcagacttcatcacctgattcttccaat
gaaaattccccggcaactcccccagatgaacaaggtcaagttgatgccccaccacagctt
gaagatgaggaacctgcatttccacatactgacctggcaaagttggatgacatgatcaat
aggcctcgatgggtggttccagttttgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaaaaaaggccttgatgttaaaagtgaagcatgtcagcgatttttt
cgcgatgggctaacaatatctttcactaaaatccttacagacgaggcagtgagtggctgg
aagtttgaaattcataggtgtattatcaacaatactcatcgcctggtggagctatgtgtg
gccaagttgtcccaagactggtttccacttctagaacttctctccatggccttaaatcct
cattgcaaattccatatctacaatggtacacgtccatgtgaatccgtttcctcaaatgtt
cagttgcctgaagatgaactctttgctcgttctccagaccctcgatcaccaaaaggttgg
ctcgtggatcttctcaacaaattcggcactttaaatgggtttcagattttgcatgatcgt
tttattaatggatcagcattaaatgttcaaataattgcagcccttattaaaccatttgga
caatgctatgagtttctcactcttcatacggtgaaaaagtacttccttccagtaatcgaa
atggttccacagtttttagaaaacttaactgatgaagaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctttcaatgattattaaatctttgaaaaatttagcttcaagg
gttccaggacaagaagaaactgttaaaaatttagaaatatttaggttaaaaatgatactt
agattattgcagatttcttcttttaatggaaagatgaatgcacttaatgaagttaataag
gtgatatctagtgtatcatactacactcatcggcatggtaaccctgaggaggaagaatgg
ctcacagctgaacgaatggcagagtggatacagcagaacaatattttatccatagtcttg
cgagatagtcttcatcaaccacagtatgtagaaaagctagagaagattcttcgttttgtc
atcaaagaaaaggccctgaccttacaagatcttgataatatctgggcagcgcaggcgggg
aagcatgaagccattgtgaagaatgtacatgatctactggcaaagttggcatgggatttt
tctcctgagcaacttgatcatctttttgattgctttaaggccagttggacaaatgcaagt
aaaaagcagcgagaaaagctacttgagctgatacgtcgtcttgcagaagatgataaagat
ggtgtgatggcacacaaagtgttgaacctcctgtggaatctggcccatagtgatgatgtg
cctgtagacatcatggacctggctctcagtgcccacataaaaatactagattatagttgc
tcccaggaccgtgacacacagaagatacagtggatagatcgctttatagaagaacttcgt
acaaatgacaaatgggtaattcctgcactgaaacaaataagagaaatttgtagtttgttt
ggcgaagcacctcaaaatttgagtcaaactcagcgaagtccccatgtattctatcgccat
gacttaatcaatcaacttcagcacaatcatgccctagttactttggtagcagaaaacctt
gcaacttatatggaaagcatgagactatatgctagagaccatgaagactatgacccacaa
actgtgaggctgggaagtagatatagtcacgttcaagaagtccaagaacggcttaacttc
cttagatttttattgaaggatggccaattgtggctctgcgctcctcaggcaaaacaaata
tggaaatgcttagcagagaacgcagtttacctttgtgatcgtgaagcctgttttaagtgg
tattccaagttgatgggtgatgaaccagacttggatcctgatattaataaggacttcttt
gaaagcaatgtacttcagcttgatccttctctactgactgaaaatggaatgaaatgtttt
gagcgattcttcaaagctgtgaattgtcgagaaggaaaactagtagcaaaaaggagagca
tatatgatggatgatttggaattaataggattagactacctttggagggtggtgattcag
agtaatgatgatattgccagcagagctatagatctccttaaagagatatacacgaacctt
ggtccaaggctacaggtcaatcaggtggtaatccatgaagacttcattcagtcttgcttt
gatcgcttgaaagcctcctatgacacactgtgtgttttggatggtgacaaagacagtatt
aattgtgcaagacaggaagctgttcgaatggttcgagtattaactgtgttacgggagtat
ataaatgaatgtgacagtgattatcatgaggaaagaacaattctacctatgtcaagagct
ttccgtggtaaacacctttcttttatagttcgatttccaaaccagggcagacaggttgat
gacttggacgtatggtctcatacaaatgatacaatcggttcagtacgacgatgtattctc
aatcgtatcaaagccaatgtagctcatacaaaaattgagctctttgtaggcggtgaactg
atagatcctgcagatgatagaaagttgattggacagttaaacttaaaggataaatcgcta
attacagccaaacttacacaaataagttccaatatgccttcaagccctgatagttcttct
gattcctcaactggatctcctggaaaccatggtaatcattacagtgatggtcccaatcca
gaagtggaaagctgtttgcccggggtgataatgtcactgcatcccagatacatctctttc
ctttggcaagttgcagacttgggtagcagcctaaatatgccacctcttagagatggagca
agagtacttatgaaacttatgccaccagatagcacaacaatagaaaaattaagagctatt
tgtttagaccacgccaaacttggagaaagcagccttagtccatctcttgactcgcttttc
tttggtccttcagcctcacaagtgctatacctaacagaggtagtctatgccttgttaatg
cctgctggtgcacctctggctgatgattcctctgattttcaatttcacttcttgaaaagt
ggtggcctaccccttgtcctgagtatgctaaccagaaataacttcctaccaaatgcagat
atggaaactcgaaggggtgcctacctcaatgctcttaaaatagccaagctgttgctaact
gccattggctatggccacgtacgagctgtggcggaagcttgtcagccaggtgtggaaggc
gtgaatcccatggcgtcggtcaaccaagttactcatgatcaagcagtggtgctacaaagt
gcccttcagagcattcctaatccgtcatctgaatgcatgcttagaaatgtgtcaattcgt
cttgctcagcaaatatctgatgaggcttcaagatatatgcctgatatttgtgtaattaga
gctatacaaaaaattatctgggcatcaggatgtggggcattacagctagtatttagccca
aatgaagaaatcactaaaatttatgagaagaccaatgcaggcaatgaaccagatttggaa
gatgaacaggtttgctgtgaagcattggaggtgatgacgttatgttttgccttgattccg
acagccttagatgctcttagtaaagaaaaggcttggcagacattcattattgatttactg
ttgcactgtcacagcaaaactgttcgccaggtggcacaggagcagttctttttaatgtgc
accagatgttgcatgggacacaggcctttactcttcttcattactctgctcttcaccgtt
ttggggagcacagccagagagagagctaaacattcaggcgactactttactcttttaagg
caccttcttaattatgcttacaatagtaatattaatatacccaatgctgaagttcttctc
aataatgaaattgattggcttaaaagaattagggatgatgttaaaagaacaggtgaaacg
ggtgttgaagagacaatcttggaaggtcaccttggagtaacaaaagagttactggccttt
caaacccctgagaaaaaatatcatataggttgtgaaaaaggaggtgctaatctcattaag
gaattaattgatgatttcatcttccctgcatccaatgtttacctacggtatatgagaaat
ggagaactgccagctgaacaggctattccagtctgtagttcaccagctaccattaatgca
ggctttgagttacttgtagcattagctgttggctgtgtgaggaacctcaaacagatagta
gattctttgactgaaatgtactacattggcacagcaataactacttgtgaagcacttact
gagtgggaatatctgccacctgttggaccccgcccaccaaaaggatttgtggggctgaaa
aacgctggggctacttgttatatgaattctgtgattcagcaactctacatgattccatcc
attaggaatggtattctcgcaattgaaggcacaggtagcgatgtagatgatgatatgtct
ggggatgagaagcaggacaacgagagcaatgttgatcccagagatgatgtatttggatac
cctcaacagtttgaagagaaaccagcattaagtaaaacagaagataggaaagagtacaat
attggtgttctaagacaccttcaagtcatctttggtcatttagctgcttctcgactacag
tactatgtacccagaggattttggaaacagttcaggctttggggtgagcctgttaatctt
cgtgaacaacatgatgctttagaattttttaattcattggtggatagtttagatgaagct
ttgaaagccttaggacacccagctatgctaagtaaagttttaggaggttcctttgctgat
cagaagatttgccaaggctgcccacatagatacgagtgtgaagaatcttttacgactttg
aatgtagacattagaaatcaccaaaatcttcttgattctttggaacaatatgtcaaagga
gatttattagaaggtgcaaatgcttatcattgtgaaaaatgcaataaaaaggttgatact
gtaaagcgcttgcttattaaaaaattacctcctgttcttgctatccaactaaaacgattc
gactatgactgggaaagagaatgtgcaatcaagtttaatgattattttgaatttcctcgc
gaactggacatggaaccttacacagttgccggtgttgcaaagctggaaggagataacgta
aacccagagagtcagttgatacaacagaatgagcagtctgacagtgagccaacaggaagc
acgaaatacagacttgtgggggtgctcgtacacagtggtcaggcgagcgggggacattac
tactcttacatcattcaaaggaacggaggagatggcgagagaaatcgctggtataaattt
gatgatggagatgtaactgaatgtaaaatggatgatgatgaagaaatgaaaaaccagtgt
tttggtggagagtacatgggagaagtatttgatcacatgatgaagcgcatgtcatacagg
cgccagaaaaggtggtggaatgcttatatacttttttatgaacgattggacacaatagac
caaggtgatgagttgataaggtatatatcagagcttgctatcaccacaagaccgcatcag
atcattatgccatcagccattgagagaagtgtgcggaaacagaatgtgcagttcatgcat
aaccgaatgcagtacagtatggaatattttcagtttatgaaaaaactgcttacgtgtaat
ggtgtttacttaaatcctcctccagggcaagatcacctgttgcctgaagcagaagaaatc
actatgattagtattcaacttgccgctaggttcctctttaccacaggatttcacaccaag
aaagtagtccgtggctctgccagtgattggtacgatgcattatgtattctccttcgtcac
agcaagaatgtacgtttttggtttgctcacagtgtcctttttaatgtttcaaatcgcttc
tctgaataccttctggagtgccctagtgcagaagtgagaggtgcatttgcaaaacttata
gtttttattgcacatttttccttgcaagatgggccatgtccttcaccttttgcatctcca
ggaccttctagtcaggcttatgacaacttaagcctgagtgatcacttactaagagcagta
ctaaatctactgagaagagaagtttcagagcatgggcgtcatttacagcagtatttcaac
ctgtttgtaatgtatgccaatttaggtgtggcggagaagacacagcttctgaaattgagt
gtacctgctacctttatgcttgtgtctttagatgaaggtccaggtcctccaatcaagtat
cagtatgctgaattaggcaaattatactcagtagtgtcacagctaatccgatgctgcaat
gtctcgtcaagaatgcagtcttcaatcaatggtaatcctcctcttcccaatccttttggt
gatcctaatttatcacaacctataatgccaattcagcagaatgtggcagacattttattt
gtgaggacaagttatgtgaagaaaatcattgaggactgcagtaactcagaggaaaccgtc
aaattgcttcgtttttgctgctgggagaatcctcagttctcatctactgtcctcagtgaa
cttctctggcaggttgcatattcctatacttatgaactccggccctatttggatctgctt
ttgcaaatcttactgattgaggactcctggcagactcacagaattcataatgcacttaaa
ggaatcccagatgaccgagatgggctctttgacacaatccagcgctctaagaatcactat
caaaaaagagcataccagtgtataaaatgtatggtagctctctttagcaattgtcctgtt
gcttaccagattctgcagggcaatggagatcttaaaagaaagtggacctgggcagtggaa
tggcttggagatgaacttgaaagacgaccatacactggcaatcctcaatacacttacaac
aattggtctcctccagtgcaaagcaatgaaacatcaaatggttatttcttggagagatca
catagtgctaggatgacacttgcaaaagcttgtgaactctgtccagaggaggtaaaaaaa
gccgccagtgtgcagcagatagaaatggaagaaagcaaagagccagatgaccaagatgcc
ccagatgagcatgagtcgcctccacctgaagatgccccattatacccccattcacctgga
tctcagtatcagcagaataaccatgtgcatggacagccgtatacaggcccagcagcacat
cacatgaacaaccctcagagaactggccagcgagcacaagaaaattatgaaggcagtgaa
gaagtatccccacctcagacgaaggatcagtga
DBGET
integrated database retrieval system
