Phocoena sinus (vaquita): 116748357
Help
Entry
116748357 CDS
T07759
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116748357 (NPAS3)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116748357 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
PAS_4
DUF7510
Motif
Other DBs
NCBI-GeneID:
116748357
NCBI-ProteinID:
XP_032477013
Ensembl:
ENSPSNG00000017739
LinkDB
All DBs
Position
2:112129121..112887223
Genome browser
AA seq
822 aa
AA seq
DB search
MRDFANQGDPPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFA
LNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQG
TAEDAASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYK
VIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNII
YCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGG
YIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDS
ESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNTCDNDMNCNDDGHSSSNPD
SRDSDDSFEHSDFENPKAAEDGGGFGALGPMQIKVERYVESESDLRLQNCESLSSDSAKD
SDSASEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGGLDAGLVEPPRLLSSPNS
ASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPPGGAGGGG
LHVAIPDSVLTPPGADGTAAAARKTQFGTSAPAALAPVASDPLSPPLSASPRDKHPGGGS
SGGGSGPGAPNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRY
APAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSA
ASLTQMPTGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagagactttgctaaccagggggaccctccatggaacttgcgaatggaaggccctcca
cctaacacgtcagtaaaaggtgcacagcgaaggagaagccccagtgcactggccattgaa
gtatttgaagcacatttgggaagtcacattttgcagtccctggatggctttgtatttgca
ctaaatcaagaaggaaaatttttgtacatttctgaaacagtctccatctacctaggcctc
tcgcaagtggagctgacaggcagcagcgtctttgactatgtccaccccggggaccacgtg
gagatggcagagcagctgggcatgaagctcccgcccgggcggggtctcctctcgcagggc
accgctgaagatgcagccagctcagcatcttcctcttcccagtcagaaaccccagagcca
gtggaatcaaccagccccagcctgctaaccactgacaacactcttgagcgttcgtttttc
atccgaatgaaatctacgctgaccaagcgcggcgtgcacatcaaatcatcaggatataag
gtgattcacataacgggccggctacgactaagggtgtcgctgtcccacgggaggaccgtc
cccagccaaatcatgggtctcgtggttgtggctcatgccttgcctccgcctacgatcaat
gaagtcagaattgactgccatatgttcgtcactcgagtaaatatggacctcaatatcatt
tactgtgaaaataggattagtgattatatggatctgactcctgtagacattgtagggaaa
agatgctaccacttcatccacgctgaagacgtcgagggcatcaggcacagtcacctggac
ttgctgaataagggccaatgcgtgacaaagtactatcgttggatgcagaagaatggagga
tatatttggatacagtctagtgccacaatagctattaacgccaagaacgcaaatgagaaa
aacatcatctgggtcaattatcttctgagcaaccccgagtacaaggacacgccaatggac
atcgcacagcttccccacctgccggagaaaacttcggaatcctcagagacctccgactct
gagtcagactctaaagacacctcaggtattacagaggacaacgagaactccaagtccgac
gagaaggggaaccagtccgagaacagcgaagacccggagcccgaccgcaagaagtcaggc
aacacgtgcgacaacgacatgaactgcaacgatgacggccacagctccagcaacccggac
agccgcgacagcgacgacagcttcgagcactcggactttgagaaccccaaggcggccgag
gacggcggcggcttcggcgcgctgggccccatgcagatcaaggtcgagcgctacgtggag
agcgagtcggacctgcggctgcagaactgcgagtcgctgtcgtcggacagcgccaaggac
tcggacagcgcgagcgaggcgggcgcgcaggcctccagcaagcaccagaagcgcaagaag
aggcggaaacggcagaagggcggcagcgccagccgccggcgcctatccagcgcgtcgagc
cccggcggcctggacgcgggcctggtggagcccccgcggctgctgtcctcccccaacagt
gcctcggtgctcaagatcaagacggagatctcggaacccatcaacttcgacaacgacagc
agcatctggaactacccgcccaaccgggagatctcccggaacgagtcgccctacagcatg
accaagccccccagctccgagcacttcccgtccccgccgggcggcgcaggcggcgggggg
ctgcacgtggccatccccgactcggtcctcactccgcccggtgccgacggcacggccgcc
gccgcccgcaagactcagttcggcacctcggcccccgcggccttggcccccgtcgcctcc
gacccgctgtcgcccccgctctcggcgtccccgcgggacaagcaccccgggggcggaagc
agcggcggcgggagcggccccggagcgcccaactccttgctgtacactggggacctagag
gcgctgcagaggttgcaggcgggcaacgtcgtgctgccgctggtgcacagggtgaccggg
acgctggcggccaccagcacggccgcgcagagggtctacaccacgggcaccatccgctac
gcgccagccgaggtgaccctggccatgcagggcaacctgctgcccaacgcgcacgctgtt
aacttcgtggacgttaacagcccgggcttcggccttgaccccaagacgcccatggagatg
ctctaccaccacgtgcaccggctcaacatgtcgggaccgtttggcggcgccgtgagcgcg
gccagcctgacgcagatgcccaccggcaacgtgttcaccacggccgagggactcttctcc
acgctgcccttccccgtctacagcaacggcatccacgcggcacagactctggagcgcaag
gaggactga
DBGET
integrated database retrieval system
