Phocoena sinus (vaquita): 116748375
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Entry
116748375 CDS
T07759
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116748375 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116748375 (MYO5A)
04131 Membrane trafficking [BR:
psiu04131
]
116748375 (MYO5A)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116748375 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116748375 (MYO5A)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116748375 (MYO5A)
mRNA cycle factors
P-body specific factors
116748375 (MYO5A)
Membrane trafficking [BR:
psiu04131
]
Others
Actin-binding proteins
Myosins
116748375 (MYO5A)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116748375 (MYO5A)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116748375 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_16
Myosin_N
AAA_22
nSTAND3
NPHP3_N
MC7
Motif
Other DBs
NCBI-GeneID:
116748375
NCBI-ProteinID:
XP_032477042
Ensembl:
ENSPSNG00000003460
LinkDB
All DBs
Position
2:81956056..82150299
Genome browser
AA seq
1880 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKILLLHLEDGRDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRHRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGDANNFHYTKQGGSPVIEGVD
DAKEMAQTRQACTLLGISESYQMGIFRILAAILHLGNVGFMSRDSDSCTIPPKHEPLSIF
CDLMAVDFEEMCHWLCHRKLATAAETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QVLHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PSSATSSGRTLLTRTPAKPTKGRPGQAAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SERKQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKFLRMCKAAITVQRYVRGHQARCYAKFLRRTKAATIIQKYWRMYVIRRRYKIWRTA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKWVRGWLARTYYKRSMHAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGIYNSE
TEKLRSDLERLQLSEEEAKIATGRVLSLQEEIAKLRKDLEQTQCEKKSIEECADRYKQET
EQLVSNLKEENTLLKQEKEALNHLIMEQAKEMTETMEKKLIEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMVNVPKPGHKRTDSTHSSNESEYTFSSEIAETEDIPSRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNR
SSAMDGHELNEDGELLLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNR
QQQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDL
MEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQG
MLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTS
TINSIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDL
AEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIAD
EGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAVTLNNLLLRKDMCSWSK
GMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALT
TAQIVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSS
LALETIQIPASLGLGFISRV
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcggagctctacacaaagtttgccagggtttggatacctgatcccgaggaa
gtttggaagtcagcagagttgctcaaagattataagccaggagataaaatcctcctgctt
caccttgaggatggaagggatttggaatatcgtctagatccaaagacgaaggagctgcct
cacttaagaaaccctgacatacttgtgggtgaaaatgacctcacagccctcagctatctt
cacgagcctgctgtactccacaatctcagagtccgctttattgattccaaacttatttat
acatattgtggtatagtcctagtagctataaatccttatgaacagctgcctatttatgga
gaagatattattaatgcatatagcggtcagaacatgggtgatatggatccacatatcttt
gcagtagctgaagaagcttacaagcaaatggccagagatgaacgaaatcagtccatcatt
gtaagtggagagtctggggcaggaaaaacagtttcagctaagtatgccatgcgatacttt
gcaactgtaagtggttccgccagtgaagccaatgttgaggaaaaggtgttggcatccaac
cccatcatggagtcaatcggaaatgctaagacaaccaggaatgataatagcagccgtttt
gggaagtacattgagattggttttgataagagacatcgaatcattggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaggagagaaactatcat
atcttctatcagctttgtgcctcagcaaagttacctgaatttaaaatgctgcgattagga
gacgcaaataactttcattacacgaagcaaggtggcagtcctgtgattgaaggagtagat
gatgccaaggagatggcacaaaccaggcaggcctgcactttgctaggaattagtgaatct
tatcagatgggaattttccgaatacttgctgccatccttcacttaggcaatgttggattt
atgtctcgagattcagacagctgcacaatccctcccaagcatgaacctctcagcatcttc
tgtgacctcatggctgtggactttgaggagatgtgtcactggctctgccatcggaagctg
gctactgccgcggagacatacatcaagcccatctccaagctgcaggccacgaatgcccgt
gatgcactggccaagcacatctatgccaagctctttaactggattgtagatcatgtcaat
caggttctccattctgctgtcaaacagcactcttttattggcgtgctggacatttatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcagcaattcaatatgcatgtcttcaaattagaacaagaggaatatatgaaagaa
caaattccatggacactcatagatttttatgataatcagccttgcattaatcttatagaa
tctaaactgggcattctagatttgctggatgaggaatgcaagatgcctaaaggcacagat
gacacttgggcccaaaaattgtacaacacacatttgaacaaatgtgcgctctttgagaag
ccccgtctatcaaacaaagctttcatcatccagcattttgctgacaaagtggaataccag
tgtgaaggctttctggaaaagaataaagacactgtttttgaagaacaaattaaagttctt
aaatcaagcaagtttaagatgctaccagaattatttcaagatgatgagaaggccatcagt
ccaagctcagccacctcttcagggcgcacgctccttacccgcactcctgcaaagcccacc
aaaggcagaccaggccaggcggccaaagagcacaagaaaacggtggggcaccagttccga
aactcccttcacctgcttatggagaccctgaatgccactacccctcactacgtgcgctgt
attaagcctaacgacttcaagttcccattcacgtttgatgagaagagggcagtacagcag
ctgagagcgtgcggtgtcctggaaaccatccgaatcagcgcagcaggtttcccctctcgg
tggacttaccaagaatttttcagccgctaccgtgtcctaatgaagcaaaaagatgtgcta
agtgagaggaaacaaacatgcaagaatgttttagagaaactgatacaggacaaggacaaa
taccagtttgggaagacaaagatctttttccgtgccggtcaagtggcctatctggaaaaa
ttgagggcagacaaattgagggctgcctgcatccggatccagaagacgatccgagggtgg
ctgctgcggaagaagttcctgcgcatgtgcaaggctgccatcactgtgcagagatacgtg
cgaggccaccaggcccgatgttatgctaagttcctgcgcagaaccaaggccgcaaccatc
attcagaagtactggcgcatgtatgtaatccgccggaggtacaagatctggcggactgcc
acgatcgtccttcagtcttaccttcgaggctacttggccagaaataggtatcgcaagata
ctccgtgagcacaaagcagtcatcattcagaagtgggtccggggctggctggctcgcacc
tactacaagaggagtatgcacgccatcatctaccttcagtgctgcttccggcggatgatg
gccaagcgcgagctgaagaagctcaagatcgaggcccgctccgtggagcgctataagaag
ctccacattggcatggagaacaagatcatgcagctgcagcgcaaagttgacgaacagaac
aaagactacaaatgcctcatggagaaactgaccaatctggaaggaatatacaactctgag
accgagaaactacgaagtgacttagaacgtcttcaactaagtgaggaagaagctaagatt
gctactggacgtgtcctcagtctgcaggaagaaattgccaagctccggaaagacctggaa
caaactcagtgtgagaaaaaatccattgaagagtgtgctgatagatacaaacaagaaact
gagcagttggtatcaaatctgaaggaagaaaatactttgctgaagcaggaaaaagaggcc
ctcaatcaccttatcatggagcaggctaaggagatgacagagactatggaaaagaagtta
atagaagaaacaaaacaactggaactcgatcttaatgatgaaaggctgagatatcagaac
cttctgaatgagttcagtcgcttggaagaacgatatgatgacctcaaggaagagatgact
ttgatggttaatgtgcctaagcctggacacaagagaacagactccacccacagcagcaat
gagtccgaatacacctttagctctgaaattgcagaaactgaagacattccatctaggaca
gaggagccaagcgagaagaaggtgcctctggacatgtcattgttcctcaagctccagaag
cgggtcacagagctggagcaggagaagcagctgatgcaggatgagctggaccgcaaggag
gagcaggtgctccgaagtaaggcaaaggaagaagaaagaccacaaatcagaggtgcagaa
ctggaatatgagtcactcaagcgtcaagaactagaatcagaaaacaaaaaactgaaaaat
gagctgaatgagttacgcaaggcccttagtgagaaaagtgcccccgaggtgaccgctcca
ggtgcaccagcctaccgtgtcctcatggagcagctgacctctgtgagtgaggagctcgat
gtccgcaaggaggaagtcctcatcttgaggtctcaactggtgagccagaaagaggccatc
caacccaaggatgacaagaatacaatgacagattccacaatacttttagaagatgtacaa
aaaatgaaagataaaggcgaaatagcacaagcatatatcggtttgaaagaaacaaacaga
tcatctgctatggatggccatgagttgaatgaggatggagagctgttgctggtttatgaa
gggttgaaacaagccaacaggctcctggaatcccagctgcagtcgcagaagaggagccat
gagaatgaggccgaagccctccgcggggagatccagagcctgaaggaggagaacaaccgg
cagcagcagctgctggcccagaacctgcagctgcccccagaggcccgcatcgaggccagc
ctgcagcacgagatcacccggctcaccaacgagaacctgtattttgaggaattatatgca
gatgatcctaagaagtatcaatcatatcggatttcactttacaaacggatgattgatttg
atggaacaactcgaaaaacaagataagactgtccggaaactgaaaaaacaactgaaagta
tttgccaaaaaaattggtgaactagaagtgggccaaatggagaacatatccccaggacag
atcattgatgagcccattcgtccagtcaacattcccagaaaagaaaaggatttccaagga
atgctggaatacaagaaggaggatgagcaaaaacttgttaagaacttgattctggaactg
aagccacgtggtgtagcagtcaatttgattccagggttaccagcgtatatcctgtttatg
tgtgttcgacacgctgactacctgaatgatgatcagaaagtaaggtcgctgctaacatca
acaataaacagcatcaaaaaagtattaaagaaaagaggtgatgattttgaaactgtctcc
ttctggctttctaacacatgccgatttttgcactgtttgaagcagtacagtggagaagag
ggctttatgaaacacaacacatctcgccagaatgaacactgcctcaccaattttgacctg
gctgagtaccgacaggtgctaagtgacttggccattcagatctaccagcagctcgtgcgg
gtgttagagaacatccttcagccaatgatcgtctccggaatgctagagcatgaaaccatt
cagggtgtgtctggggtgaagcccacagggctaagaaagcgaacctccagcattgctgat
gagggtacctacacactggactccatcctgcggcagctcaactctttccactcagtcatg
tgtcagcacggcatggaccccgaactgatcaagcaggtggtcaagcagatgttctacatc
gtgggggccgtcacactgaacaacctcctcctccggaaggacatgtgctcctggagtaaa
ggcatgcagatcaggtacaatgtcagtcaactagaagaatggctgcgtgacaagaatctg
atgaatagtggggctaaggaaaccctggaacctctcattcaggctgctcagcttttgcaa
gtgaaaaagaaaacagatgatgatgcagaagccatttgttccatgtgcaatgctttaact
actgcccagattgtcaaagtgttgaatttgtatactccagttaacgagtttgaagaaaga
gtctctgtgtcatttattcgtactatacagatgcgtttacgagacaggaaagactctcct
cagctgctcatggatgctaaacacatctttcctgtcacctttccttttaacccatcttcc
cttgcactagaaaccatccagattccagccagcctgggcctgggattcatatcacgggtc
tga
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integrated database retrieval system
