Phocoena sinus (vaquita): 116748432
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Entry
116748432 CDS
T07759
Symbol
MTA1
Name
(RefSeq) metastasis-associated protein MTA1 isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116748432 (MTA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116748432 (MTA1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116748432 (MTA1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116748432 (MTA1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
116748432 (MTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Mod_r
Motif
Other DBs
NCBI-GeneID:
116748432
NCBI-ProteinID:
XP_032477242
Ensembl:
ENSPSNG00000017276
LinkDB
All DBs
Position
2:178078534..178116179
Genome browser
AA seq
872 aa
AA seq
DB search
MESTCGFSVRGACAGLRSGGPGRAAAPSGPCSPGPPTSCRPGELRFSSTGKPRPPFSSFV
FGGEVVGRRGMCMGGGDRGLAASVPTWSLGPAVAVPVTVLPALAVPLLGPPPGRLQPPVA
PHHPRLSLAPACHRRCSQAAGEWGAGSQAGGLARLMRSRPFADYVYFENSSSNPYLIRRI
EELNKTANGNVEAKVVCFYRRRDISSTLIALADKHATLSVCYKTGSGADNGEEGETEEEM
ENPEMADLPEKLKHQLRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLEREDFF
FYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKEGEEDGRDQAKLETKVWEVHNPLVD
KQIDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHRSLYDVAK
AISALVPQGGPVLCRDEMEEWSASEASLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYY
YMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQISVNNVKAGVVNGAGAPGQSP
GAGRACESCYTTQSYQWYSWGPPNMQCRLCASCWTYWKKYGGLKMPTRLDGERPGPNRSN
MSPHGIPARSSGSPKFAMKTRQAFYLHTTKLTRIARRLCREILRPWHAARHPYMPINSAA
IKAECTARLPGASQSPLVLKQAARKPLEAVLRHLETHPRPPKPDPVKSVSGVLGGLTPAK
SAPVINNGSPTILGKRSYEQHNGVDGNVKKRLLMPSRGTYLGLANHGQTRHMGPSRNLLL
NGKAYPTKVRLIRGGSLPPVKRRRMNWIDAPDDVFYMATEETRKIRKLLSSSETKRAARR
PYKPIALRPSQTLPLRPAPPAPVNDEPIVIED
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacgtgtggtttttctgtgaggggagcctgtgctggcttgaggtctggggga
cccggcagggcggcagcaccctcgggaccctgctcccctgggcccccgacctcgtgccgc
cctggcgagctccgtttctcctccaccggcaagccccggcctccgttcagctcttttgtc
tttggaggagaggtggtgggacgccgggggatgtgcatgggggggggtgaccggggcctg
gcagcctccgtgccgacgtggtctctggggccggccgtagcagtgcctgtgaccgtcctt
cccgccctggcggtaccgctcttggggccccctccgggccggctgcagccccccgtggcc
ccccaccacccccgcctgagcctggcccccgcctgccaccgcagatgcagccaggccgcg
ggcgagtggggggccggctcccaggctggcggactcgcgaggctgatgcgctctcgcccg
tttgcagactacgtctacttcgagaactcctccagcaacccgtacctgatccggaggatc
gaggagctcaacaagacggccaacgggaacgtggaggccaaggtggtgtgcttctaccga
aggcgggacatctccagcacgctcatcgccctggccgacaagcacgccaccctatcggtc
tgctataaaaccggatcgggggccgacaacggcgaggaaggtgaaacagaggaggaaatg
gagaacccagaaatggcagacctgcccgagaagctcaagcaccagctgaggcatcgagag
ctcttcctctccagacagctggagtcactgcccgccacccacatcagagggaagtgcagc
gtcactttgctcaacgagactgagtccctcaagtcctacctggaacgggaggacttcttc
ttctactctctcgtctatgacccccagcagaagaccctcctggctgacaagggggagatc
cgtgtcgggaaccggtaccaggcggacatcaccgacctgctgaaagaaggcgaggaggac
ggccgagaccaggccaagctggagaccaaggtgtgggaggttcacaacccgctggtggac
aagcagatcgaccagttcctggtggtggcccgctccgtgggcacctttgcacgcgccctg
gactgcagcagctctgtccggcagcccagcctgcacatgagcgccgcggccgcctctcgg
gacatcaccctgttccacgccatggacacgctgcacaggagcctgtacgatgtcgccaag
gccatctcggccctggtgccgcagggcgggcccgtcctctgcagggacgagatggaagag
tggtcggcctcggaggccagccttttcgaggaggctctggagaagtacgggaaggatttc
actgacattcagcaagactttctcccctggaagtcgctcaccagcatcatcgagtactac
tacatgtggaagaccaccgacagatacgtgcagcagaaacgcttgaaagcagctgaagcg
gagagcaagttaaagcaagtttatatccccaactataacaagccaaacccgaaccagatc
agcgtcaataacgtcaaggcaggcgtggtgaacggtgccggggcgccaggccagagccct
ggggccggccgggcctgcgagagctgttacaccacccagtcttaccagtggtattcttgg
ggtccccctaacatgcagtgtcgcctctgcgcgtcttgttggacatattggaagaaatat
ggtggcttgaaaatgccaacccggttagatggagagaggccaggacccaaccgcagtaac
atgagcccccacggcatcccagcccggagcagcgggagccccaagtttgccatgaagacg
agacaggccttctacctgcacaccaccaagctcacgcggatcgcccggcgcctgtgccgt
gagatcctgcgcccgtggcatgccgcccggcacccctacatgcccatcaacagtgcggcc
atcaaggctgagtgcacggcacggctgcccggagcctctcagagcccgctggtgctaaag
caggccgcgcggaagcccctggaggccgtcctgcggcacctcgagacccacccccgcccc
ccgaagcccgaccccgtgaagagcgtgtccggcgtgctcggcggcctgaccccggccaag
tcggcccccgtcatcaacaacggctcccctaccatcctgggcaagaggagctatgagcag
cacaacggggtggacggcaacgtgaagaagcgcctcttgatgcccagtaggggcacctac
ctgggtttggcgaatcacggacagaccaggcacatgggaccaagccggaacctgctgctc
aacgggaaggcgtaccccaccaaggtgcggctgatccgggggggctccctgccccccgtc
aagcggcggcggatgaactggatcgacgcccccgatgacgtgttctacatggccaccgag
gagaccaggaagatccgcaagctgctctcgtcctccgagaccaagcgcgcggcccgcagg
ccctacaagcccatcgccctgcgccccagccagaccctgccgctgcggccggccccgcca
gcgcccgtcaacgacgagcccatcgtcatcgaggactag
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