Phocoena sinus (vaquita): 116748434
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Entry
116748434 CDS
T07759
Symbol
ARHGEF40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116748434 (ARHGEF40)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116748434 (ARHGEF40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RHG20_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
116748434
NCBI-ProteinID:
XP_032477253
Ensembl:
ENSPSNG00000013481
LinkDB
All DBs
Position
2:101670717..101692086
Genome browser
AA seq
1524 aa
AA seq
DB search
MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLA
RVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLA
LKCLAPGGGRVQELPVPNEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAE
LICPRFVHKGGLMVGHRPSTLPPEVPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEG
EYVELLEVTLPVRGSPTDADGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQ
DGARPPGEGSSTGASPACPPGAEAEALPEAAALEVSEPPAEALGEASEFCPLRPGEVGGG
AGQGAEGPPGTPRRAGKGNRRKKRAAGRGALNRGGDSAPLSPGDKEETSHQEALVSPPPP
SEHELPGCGPVKEEHEGSGKPDPEPREELKPADEEEPRPPEACGPVEERARERELEGPRL
VRVAGPSNPEGLLSDPLAPSPETVQEVKGDSIPEEATPVSSSDDPGVAWDLMSSGCLILT
GGVDQSGRALLTITPPCPPEEPPPSEDVLSTALHYLHSLLRPDLQVLGLSVLLDLRKAPA
LPPALIPVLSQLQDSGDPPVIQRLLLLTHDDPPTELHGFQGAELLSESDLKRVAKPEELQ
WDLGGHRDPSPSHWVETHKEVERLCRLCRGVLGSVRRAIEELERAADPEGEEAAGMPEPL
QKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPATLYQEVDEAIHQLVRLSNLHVQQ
QEQRQRLHRLQQVLQWLSGPGEEQLVSFAVPGDSLSALQETELRFRAFSAEVQEHLAQAR
EALALEEDPASQKVLDIFEQRLEQVESGLHRALRLQRFFQQAHEWVDEGSTRLAGAGPGR
EAVLAALALRRTPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELEKRVQQQLGAE
ASPRGHRRRRADSASSGGAQRGSHSPSPSLRSLLLPSSPGPRAAPSHCSLAPCGEDYEDE
GPKLAPEAEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPEGPWGVGTPRMER
KRSISAQQRLVSELIACEQEYVATLSEPVPPAGPELTPELRGTWAAALSARERLRSFHRT
HFLRELQGCATHPLRIGACFLRHGDQFSLYAHYVKHRHKLENGLAALSPPTKGTMEGGPH
LPRALQQPLEQLARYGRLLEELLREAGPEPSSERQALGAAMQLLREQETRGKDLLAVEAV
RGCEIDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEHLLLFSKLKGPEGGSETFVYKQAF
KTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEIKLKWTSSIAQLLWRQAAHNK
ELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSP
GACSLPARVEEEAWDLDVKQISLASPPAPETFASSGDVSPGPRNSPSLQRPHPGSSTPIL
ASGGILGLSRQSHARALSDPTTPL
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgagccagtagaggactgtgtgcagagtactttggctgccctgtacccacct
tttgaggcaacagcccctacactgttgggccaggtgttccaggtggtggagaggacttat
cgagaggatgcgctgaggtacacgctggacttcctggtgcccgccaagcacctgcttgcc
agggtccagcaggaagcctgtgcccagtacagcggtttcctcttcttccacgagggctgg
cccctctgcctgcacgagcaggtggtggtgcagctagcagcactcccctggcagctgctg
cgcccaggagacttctacctgcaagtggtgccctcagcagcccaagcgccccgcctggca
ctcaagtgcctggccccagggggtgggcgagtgcaggaactgcctgtgcccaatgaggct
tgtgcttacctcttcacacctgagtggctacaaggcatcaataaggacaggccaacaggt
cgcctcagcacctgccttctgtctgcaccgtctgggattcagcgactgccctgggccgag
ctcatctgccctcgatttgtacacaaagggggcctcatggttggacatcggccaagcaca
cttcccccagaagtgccctccggccccccagggctccccagccctccactccctgaggag
gccctgggtactcggagtcccggggatgggcacaatgcccctgctgaaggacctgagggt
gagtacgtggagctgctggaggtgacgctgcctgtgagggggagccccacggacgctgac
ggctcctcgggcctgtccaggacccggacggtacccacacgcaagggtgctggggggaag
ggccggcatcggagacaccgggcgtggatgcaccagaagggcctggggcctcgggaccag
gacggagcccgcccaccgggtgaggggagcagcactggagcctcccctgcgtgtcccccg
ggagccgaggctgaggctctccctgaggcagcagccctggaggtgtctgagcccccagca
gaggcgctgggggaagcctctgagttttgccccctgaggccaggggaggtcggaggagga
gcaggccagggggctgaagggccacccggtacccctcggagagcaggcaaaggaaacagg
agaaagaagcgagctgcaggcagaggggctcttaaccgaggaggagacagtgccccactg
agccccggggacaaggaagagaccagccaccaggaagcccttgtcagtccgcccccacca
agtgaacacgagcttccaggatgtggcccagttaaggaggagcacgaaggctcggggaag
ccagaccctgagccgagagaggagctcaaaccagcagacgaagaagagcctcggccccca
gaagcctgtgggcctgtagaagagagggccagagaaagagagctggaggggccgaggctg
gtacgcgtggcagggcccagcaatccagaagggctcctgtctgaccccctggcaccatcc
ccagagactgtgcaggaagtgaaaggggacagcatcccagaagaggccactccagtctcc
agctctgatgaccctggtgtagcttgggacttaatgtcatctggatgtctcatcctgact
ggaggagtggatcagagtgggcgagctctgctgaccattaccccaccgtgccctcctgag
gagcctccaccctccgaagacgtgctgagcactgctcttcattacctccactcactgctc
aggcctgacctacaggtactggggctgtccgtcctgctggaccttcgcaaggcacccgca
ctgcctccagcactcattcctgtcctgagtcaacttcaggactcaggagaccctcccgtc
attcagcggctgctgcttctcactcatgatgaccctccaactgaactccatggatttcag
ggtgctgagttgctgtcagagagtgatctgaaaagagtggccaagccagaggagctgcag
tgggacttgggaggtcacagggacccctctcccagccactgggtagagacacacaaggaa
gtggaaaggttgtgccgcctgtgccgaggtgtgctgggctctgtacggcgagccattgag
gagctagagagagcagcagatccagagggagaggaggcggcaggaatgcctgagccccta
cagaaggtactggcagatccccgactgacggagctgcagagggatgggggagccatcctg
atgaggctgcgctccacccacagcagcaagctggagggcccaggcccagctacactgtat
caggaggtggacgaagccattcaccagctcgtgcgcctttccaacctacacgtgcaacag
caggagcagcggcaacgcttgcaccgactccagcaggtgctgcagtggctctcaggcccg
ggggaggagcagctggtgagctttgctgtgcccggggactccctgtctgccctgcaggag
acagagctacgattccgggctttcagtgctgaggttcaggagcacctggctcaggcgagg
gaggccctggccctggaggaggaccctgcctcccagaaggttctggatatctttgaacag
cgcctggagcaggttgagagtggcctccaccgggctctgcggctacagcgcttcttccag
caggcacatgaatgggtggacgaaggttccacgaggctagcaggagctgggccggggcgg
gaagcagtgctggcagccctggccctgcggcgcaccccggagcccagcgctggcaccttc
caggagatgcgggccctggccctggacctgggcagcccggcggctctgcgagagtggggc
cgctgccgggcccgctgccaagagctggagaagagggttcagcaacagctgggagcggag
gcgagtccacggggccaccggcgacgacgggcagacagtgccagcagtggaggggctcag
cggggctcccacagcccctcacccagcctccgttccctgctgctccccagcagtcccggg
ccgcgggcagccccgtcccactgctccctggcgccctgtggggaggactatgaagacgag
ggccccaagctggctccggaagcagagggcagaccgccgaggaccgtgctgatccgaggc
ctggaggtcaccagtacggaggtggtagacaggacgtgctcaccccgggaacacgtgctg
ctgggccgggccgggggcccagaagggccctggggagtaggcaccccccggatggagcgc
aagcgaagcatcagcgcccagcagcgtctggtgtctgagctgattgcctgtgagcaggag
tacgtggccaccttgagtgagccagtgccacccgctgggcctgagctgacccctgaactg
cggggcacctgggccgcggccctgagcgcccgggagaggctccgcagtttccaccggaca
cactttctgcgggagcttcagggctgcgccacccaccccctgcgcattggggcctgcttc
cttcgccatggggaccagttcagcctttacgcccactatgtgaagcaccggcataaactg
gagaatggtctggctgccctcagtcccccaaccaagggcaccatggaagggggccctcat
ctgccccgggccctgcagcagcctctggagcagctggccaggtatgggcggctcctggag
gagctcctaagggaagctgggcctgaaccaagttctgagcgccaggcccttggggctgcc
atgcaactgctccgggaacaagagacccgcggcaaagacctgctggctgtggaggcggtg
cgtggctgcgagatagatctgaaggagcagggacaactcctgcaccgggaccctttcaca
gtcatctgtggccggaaaaagtgccttcgccacgtctttctctttgagcatctcctcctg
ttcagcaagctcaagggccctgagggggggtcagagacctttgtttataagcaggccttt
aagactgctgacatggggctaacagaaaacatcggggacagtgggctctgctttgagctg
tggtttcggcggcggcgtgcacgagaggcgtacactctgcaagcagcctcaccagagatc
aaactcaagtggacgagttctattgcccagctgctgtggagacaggcggcccacaacaag
gagctccgagtgcagcagatggtctccatgggcattgggaataaacccttcctggacatc
aaagcccttggggagcggacgctgagtgccctgctcactggaagagccgcccgcacccgg
gcctcggtggccgtgtcatcttttgagcatgccggcccctcccttcccggtctttccccg
ggagcctgttccctgcctgcccgcgtcgaggaggaggcctgggatctggacgtcaagcaa
atttccctggcttcccctccagccccagaaacatttgcctcttctggagatgtgtcccca
ggaccaagaaacagtcccagcctgcaacgcccacaccctgggagcagcactcccatcctg
gccagtggagggatcttagggctttcccgccagagtcatgcccgagccctgagtgacccc
accacacctctgtga
DBGET
integrated database retrieval system
