Phocoena sinus (vaquita): 116748455
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Entry
116748455 CDS
T07759
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116748455 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116748455 (SIX4)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116748455 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
116748455
NCBI-ProteinID:
XP_032477365
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Position
2:complement(137415046..137427331)
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AA seq
793 aa
AA seq
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MSSSSPTGQIASAADIKQENGMESASEGQEAPREVAGGAAAGLSPPAPAPFPLEPGDAAA
TAARVSGEEGAVAAAAAAGAAADQVQLHSELLGRHHHAAAAAAAAAAAAAAAAQTPLAFS
PDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSIL
ESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYC
FKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSE
SDGNPSTEDESSKGHEDLSPHPLSSSSDGVTNLSLSSHMEPVYMQQIGNAKISLSSSGVL
LNGSLVPASTSPVFLNGNSFIQGPNGVILNGLSVGNTQTVSLNPPKMASNIVSNGISMTD
ILGSTSQDVKEFKVLQSSSTNSAATTSYSPSAPVSFPGLIPSTEVKREGIQTVASQDGGS
VVTFTTPVQINQYGIVQIPNSGTSSQFLNGSIGFSPLQLPPVSVAASQGNISVNSSTSDG
STFTSESATVQQGKVFLSSLAPSAVVYTVPNSGQTIGSVKQEGVERSLVFSQLMPVNQNA
QVNANLSSESISGSGLHPLSSSLVNVSPTHNFSLTPPTILNPTELNPDIADSQPMSAPVA
SKSTVTSVSNTNYATLQNCSLITGQDLLSVPMTQAALGEIVPTAEAQVSHPSPTVHQDFV
REHHLVMQSVANIKENFLTNSESKATSNLMMLDSKSKYVLEGMVETVCEDLETDKKELAK
LQTVQLDEEMQDL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcggaagggcaggaggcgccccgagaagtggcggggggcgcggcg
gctgggctgagccccccggctccagcccctttccccctggagccgggggacgccgcggcc
accgccgccagggtgagcggagaggaaggggcagtggctgcagcggcggcggccggagcg
gcggcggatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgcggcc
gctgccgccgccgccgccgccgccgccgccgccgccgcgcagaccccactggccttctcg
cccgaccatgtcgcctgcgtgtgcgaggcgctgcagcaggggggcaacctggaccgcctg
gcccggttcctgtggtccctgccccagagcgacctgctacgtggcaacgaaagcctactg
aaggcgcgggcgctggtggccttccaccagggcatctaccctgagctctacagcatcctc
gagagccacagcttcgagtcggccaaccacccgctgctgcagcagctctggtacaaggcg
cgctacaccgaggccgagcgagcccgcggccggccgctgggcgccgtggacaagtaccgg
ctgcgcaggaaatttcccctgccccgcaccatctgggacggcgaggagacggtgtattgt
ttcaaggagaagtcgcgcaacgcgctcaaggagctctacaagcagaatcgctacccttcg
cccgccgagaagcggcacctggccaagatcaccggcctctccctcacccaggtcagcaac
tggttcaagaaccgccggcagcgcgatcggaacccctctgagacccagtccaaaagtgag
tcggatggcaatcctagcactgaagatgaatccagcaagggtcatgaagatttgtctcct
catccactctccagttcatccgatggtgtcaccaacctcagcctttccagtcacatggag
ccagtatatatgcaacaaattggaaatgctaaaatatcattaagctcttctggagttttg
ttgaatggaagtttggtacctgccagtacttcacctgtcttccttaatggtaattctttc
attcagggacccaatggagttatccttaatggattaagtgtgggaaatacacagacagtg
tcactgaacccaccaaaaatggcatcaaacattgtgagcaatggtatatccatgactgac
atactggggtctacctcccaggatgtgaaggaattcaaagttctccagagttcttcaact
aactcagcagccaccacctcctatagccccagtgctcctgtgtcattcccagggctgata
cccagcactgaggtgaaaagagaaggtattcaaacagtggcttcccaggacggaggttct
gtagtgacttttaccacaccagtgcaaattaaccagtatggcatcgtccagatccccaat
tccggaacaagcagtcagttccttaatgggagcattggattctctccactgcagctgcct
cctgtttcagtggcagcttcacaaggtaatatttcagtaaattcaagcacttcagatggg
agtacatttacaagtgagtccgccacagtccagcaaggaaaggttttcttgagctctctt
gctcccagtgcagtggtatacactgttcctaattcaggccagactataggatctgttaaa
caggagggtgtggagaggagcctggtgttttctcagttgatgcctgtcaatcagaatgca
caagtaaatgcaaacctgtcttctgaaagtatctcgggaagtggcctccacccactgtcc
tcctccttagttaatgtatccccaactcacaatttttccctgactccccctaccatacta
aaccccactgagctaaaccctgacattgctgatagccagccaatgtctgcacctgtggca
agcaaatctactgtgacatctgtcagcaacactaactatgcaactcttcagaactgctcc
cttattactggtcaagatctattatcagtacccatgacccaggctgcccttggggaaata
gttcccacagctgaagcccaggtgagtcacccctcccctacagtacaccaggattttgtc
agagaacatcatctggttatgcaatcagtagctaacataaaagagaatttcttaacaaat
tctgagagcaaagcaacaagcaacttaatgatgctggactccaaatccaagtatgtccta
gagggcatggttgagactgtctgtgaagacctggaaacagacaaaaaagagcttgccaag
ctccagactgtccaattggatgaagagatgcaagacttgtaa
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