Phocoena sinus (vaquita): 116748474
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Entry
116748474 CDS
T07759
Symbol
CILP
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116748474 (CILP)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116748474 (CILP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
CarboxypepD_reg
I-set
Ig_2
TSP_1
CarbopepD_reg_2
ig
TSP1_spondin
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
116748474
NCBI-ProteinID:
XP_032477406
Ensembl:
ENSPSNG00000003465
LinkDB
All DBs
Position
2:70018666..70048927
Genome browser
AA seq
1153 aa
AA seq
DB search
MVVIKACVFFFLVLEVTSLLGPGEWTTWFNIDHPGGRGDYERLDAIHFYYGHQVCPRPLR
LEARTTDWIPAGSTGQVVHGSPLEGFWCLNREQRPGQNCSNYTVRFLCPPGSLRQDTEHS
LWSLWSPWSKCSAACGHPGVQTRTRTCLAETVSLCNDATEEGRLCMEQACSACDLTCPMG
QVNADCDACMCQDFVLYGVVSLPGGAPASGATVYILTKTPKLLTQTDSSGRFRVPGLCPD
GKSILKITKTKFAPIRLTMPKTRLKAATIKAEFMRAETPYIVMNPKAKARRAGQSVSLCC
KATGNPKPDKYFWYHNSTLLDPSLYKHESKLVLRNLQRDQAGEYFCKAQSDTGAAKSHVA
RLTVIAPDETPCNPTPESYLIQLPHDCFQNATNSFYYDVGRCPVKTCAGQQDNGIRCQDA
VENCCGISKTEEREIQCSGYTLPTKVAMECSCQRCTETQSIVRGRVSASDNGEPMRFGHV
YMGNSRVSMTGYKGTFTLHVPQDTERLVLTFVDRLQKFVNTTKVLPFNKKGSAVFHEIKM
LRRKEPITLEATETNIIPLGDVAGEDPVAELEIPSKSFYRQNGEPYTGKVKASVTFLDPR
NISTATAAQSDLNFINDEGDTFPLRTYGMFSVDFTGEATSESLNVGKVKVHLDSTQVKMP
EHLPMMKLWSLNPGTGLWEEEGDFKFESQRRNRREDRTFLVGNMEIRERRLFNLDVPESR
RCFIKVRAYRSERFLPSEQMQGVVVSVINLEPRTGFSSNPRAWGRFDSVITGPNGACLPA
FCDDQSPDAYSAYVLASLAGEELEAVESSPKFNPNAIGVPQPYLNKLKYRRTDHEDPQAK
KTAFQISMAKPRPNSAEESNGPIYAFENLQACEEAPPSAAHFRFYQIEGDRYDYNTVPFN
EDDPMSWTEDYLAWWPKPMEFRACYIKVKIMGSLEVNVRSRNMGGTHRQTVGKLYGIRDV
KSTRDRDQPNVSAACLEFKCSGMLYDQDRVDRTLVKVIPQGSCHRVSVNSMLHEYLVNHL
PLAVNDNTSEYTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGTSDGSSRVMKSN
VGVALTFNCVERQVGRQSAFQYLQSTPARPSPASTVRGRAPSRRQWSSQGGQRWRRGAAS
LRFSGVAQQPLSN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatcaaggcctgcgtgttcttcttcctggtcctagaggtcacctctctgttg
ggtcctggggagtggacaacgtggttcaacattgaccacccaggtgggcggggcgactac
gagcggctagatgccattcacttctactacgggcaccaggtgtgtcctcggcccctgcgg
ctagaggctaggaccaccgactggatacccgcaggcagcactggccaagtggtccatggc
agcccccttgagggcttctggtgcctcaacagggagcagcggcccggccagaactgctcc
aattataccgtgcgcttcctctgcccgccaggatccctgcgccaagacacagagcacagc
ctctggagcctgtggtctccctggagcaagtgttctgctgcttgtggtcaccctggggtc
cagacccgaacacgcacctgcttggcggagacggtgtcactgtgcaatgatgccaccgag
gagggtcggctctgcatggagcaggcctgttcagcctgtgacctgacctgccccatgggc
caggtgaatgctgactgtgacgcctgcatgtgccaggacttcgtgctgtatggggttgtc
tccctccctgggggtgccccagcctcaggggctactgtctacatcctgaccaaaacacct
aagctattgacccagacggacagcagcgggaggttccgagtccctggcttgtgccccgat
ggcaaaagcatcctgaagatcacaaagaccaagtttgcccctatcaggctcacaatgcct
aagactagactgaaggcagccaccatcaaggcggagttcatgagggcagagactccatac
attgtgatgaaccccaaggcaaaagcacggagagctgggcagagtgtgtccctgtgctgt
aaggccacggggaatcccaaaccagacaagtatttctggtaccataacagcacactgttg
gacccctccctctacaagcacgagagcaagctggtgctgaggaacctgcaacgggaccag
gccggggagtacttctgcaaggcccagagcgacactggggctgcaaagtcccatgtcgcc
cggctgactgtcatagcccccgatgagactccttgcaacccaacccccgagagctacctt
atccagctgccccatgattgtttccagaatgccaccaactccttctactatgatgtgggt
cgttgccctgtcaagacctgtgcagggcagcaggataatgggatcaggtgccaggatgct
gtggagaactgctgtgggatctccaaaacagaggagagggagatccagtgcagtgggtac
acgctgcccaccaaggtggccatggagtgcagctgccagcggtgtacggagacccagagt
atcgttcggggacgtgtcagcgcctctgacaatggggagcccatgcgctttggccacgtg
tacatggggaacagccgtgtgagcatgactggctacaagggcacgttcaccctccacgtc
cctcaggacactgagaggctggtgctcacatttgtggacaggctgcagaagtttgtcaac
accaccaaagtgctgcccttcaataagaaggggagtgcggtgttccatgagatcaagatg
cttcggcggaaagagcccatcaccttggaggccacggagaccaacattatccccttgggg
gatgtggctggtgaagatcctgtggctgagctggagatcccatccaagagtttctaccgg
cagaacggggagccctacacaggaaaagtgaaggccagtgtgaccttcctggatccccgg
aatatttccacagctactgctgcccagagtgacctgaacttcatcaacgatgaaggagac
accttcccacttcggacatatggcatgttctctgtggacttcacaggtgaggccacctca
gagtcacttaatgttggcaaggtaaaggtccacctcgactcaacccaggtcaagatgcca
gagcacttgcccatgatgaaactctggtcactcaacccaggcacagggctgtgggaggag
gaaggtgacttcaaatttgaaagccaaaggcggaacagaagagaagacaggaccttcctg
gtgggcaacatggagatccgtgagaggaggctctttaacctggatgttcctgaaagcagg
aggtgcttcatcaaggtgagggcctaccgaagtgagaggttcttgcccagtgagcagatg
cagggtgtcgtggtctctgtgatcaacctggagcccaggactggcttctcctctaacccc
agggcctggggccgctttgacagtgtcatcactggtcccaatggggcctgtctgcctgcc
ttctgcgatgaccagtcccctgatgcctactctgcctacgtcttagcgagcctggctggg
gaagaactggaagcagtggagtcttctcctaaattcaacccaaatgcaattggtgtccct
cagccctacctcaacaagctcaagtaccgccggacagaccatgaggacccacaggccaag
aagacagctttccagatcagcatggccaaaccaaggcccaactcagccgaggagagcaat
ggacccatctatgcattcgagaacctccaggcatgcgaggaagcacctcccagtgcggcc
cacttccggttctaccagattgagggggatcggtatgactacaacacggtccctttcaac
gaggatgaccccatgagctggactgaagactacctggcatggtggcccaagccaatggag
ttcagggcctgctatatcaaggtgaagatcatggggtcactggaggtgaacgtgcgatcc
cgtaacatggggggcacccaccggcagacagtgggaaagctgtatggaatccgggatgtg
aagagcacacgggacagggaccagcccaatgtctcagctgcctgtttggagttcaagtgc
agtgggatgctctatgaccaggaccgtgtagaccgcacgctggtgaaggttatcccccag
ggcagctgccatcgagtcagcgtaaactccatgctgcatgagtacctggtcaaccaccta
ccactggcggtcaatgacaacaccagcgagtacaccatgctggcgcccttggacccactg
ggccacaactatggcatctacactgtcactgaccaggaccctcgcacagccaaggagatt
gcgcttggccggtgctttgatggcacatctgatggctcctccagagtcatgaagagcaat
gtgggagtggccctgacctttaactgcgtagagaggcaggtgggccgtcagagtgccttc
cagtacctccaaagcaccccggcccggccctccccagcaagcactgtcaggggaagagcg
ccctcaaggaggcagtggtcaagtcagggtggccagcgctggcgcagaggggcggcctct
ctgaggttttctggggttgctcagcagcctctgagcaactaa
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