Phocoena sinus (vaquita): 116748514
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Entry
116748514 CDS
T07759
Symbol
IRF9
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 9
KO
K04693
interferon regulatory factor 9
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04217
Necroptosis
psiu04380
Osteoclast differentiation
psiu04620
Toll-like receptor signaling pathway
psiu04621
NOD-like receptor signaling pathway
psiu04625
C-type lectin receptor signaling pathway
psiu04630
JAK-STAT signaling pathway
psiu05160
Hepatitis C
psiu05162
Measles
psiu05164
Influenza A
psiu05165
Human papillomavirus infection
psiu05167
Kaposi sarcoma-associated herpesvirus infection
psiu05168
Herpes simplex virus 1 infection
psiu05169
Epstein-Barr virus infection
psiu05171
Coronavirus disease - COVID-19
psiu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
116748514 (IRF9)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116748514 (IRF9)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116748514 (IRF9)
04621 NOD-like receptor signaling pathway
116748514 (IRF9)
04625 C-type lectin receptor signaling pathway
116748514 (IRF9)
09158 Development and regeneration
04380 Osteoclast differentiation
116748514 (IRF9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116748514 (IRF9)
09172 Infectious disease: viral
05160 Hepatitis C
116748514 (IRF9)
05171 Coronavirus disease - COVID-19
116748514 (IRF9)
05164 Influenza A
116748514 (IRF9)
05162 Measles
116748514 (IRF9)
05168 Herpes simplex virus 1 infection
116748514 (IRF9)
05167 Kaposi sarcoma-associated herpesvirus infection
116748514 (IRF9)
05169 Epstein-Barr virus infection
116748514 (IRF9)
05165 Human papillomavirus infection
116748514 (IRF9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116748514 (IRF9)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116748514 (IRF9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116748514
NCBI-ProteinID:
XP_032477547
Ensembl:
ENSPSNG00000011742
LinkDB
All DBs
Position
2:103687199..103694440
Genome browser
AA seq
478 aa
AA seq
DB search
MASGRARCTRKLRNWVVEQVESGQFPGVCWEDAAKTMFRIPWKHAGKQDFREDQDAAFFK
AWAIFKGKYKEGDSEGPAIWKTRLRCALNKSSEFQEVPENGHRDGAEPYKVYRLLPPGTL
PAQPGTQKSPSKRHHSSVSSERKEDEVTTKNCILSPSLLQDPLKNELVETSGGTAYSDSG
SSSNSPEPQEGRDTAEAPLQGDLVSPELLPPPGSDYSLLLTFIYDGHVVGEAQVQSLDCR
LVAEPSVSQCGMEQVIFPKPGPREPTQRLLSQLKRGVLVASNSRGLFVQRLCPIPISWSA
PQAPPGPGPHLLPSNECVELFRTAYFCRDLARYFQGLGPAPEFQVTLNFWEESPGPNHTP
QSLITVQMEQAFARHLLEKTPEDQAAILSLVQSLEDPAPSPLSVPPICFERASSSTLSTC
LPCYFAPGPLNPPDISASGPLHLLVLLTKTLFLQVLSTLRAGAPTLSYLCPSVNACEH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcagggcacgttgcacccggaagctccggaactgggtggtggagcaggtg
gagagtgggcagttcccaggagtgtgctgggaagatgcggccaagaccatgttccggatt
ccctggaagcacgcaggcaagcaggacttccgggaggatcaggacgccgccttcttcaag
gcctgggcgatatttaagggaaagtacaaggagggggactcggaaggccctgctatctgg
aagactcgtctgcgctgtgctctgaacaagagttctgagttccaggaggttcctgagaat
ggccacagggatggggctgagccctacaaggtgtaccggctgctgccacctggaaccctc
cccgctcagccagggacccagaaatcaccatcaaagcgacaccacagttctgtgtcctct
gagaggaaggaggatgaggttaccacgaagaactgcatactcagcccctccttgctccag
gaccccctcaaaaatgagctggtggagaccagcgggggaacagcctattcagactccggg
agcagcagcaacagccctgagcctcaggaaggtagggacacagctgaggcccctctccaa
ggagatctggtgtccccagagcttctgccccctccaggatcagactactctctgctgctc
accttcatctacgatggacatgtggtgggtgaggcccaggtgcagagcctggactgccgc
ctcgtggctgagccctcggtctcccagtgcggcatggagcaggtgatatttcccaaaccc
ggcccacgagagcccacccagcgcttgctgagccagctcaagagaggggtcctggtggcc
agcaactcccgaggcctctttgtgcagcgcctttgccccatccccatctcctggagcgcg
ccccaggctccacctggtccaggcccacacctgctgcccagcaacgaatgcgtggagctc
ttcagaaccgcctatttctgcagagacctggccaggtacttccagggcctgggccccgca
cccgagttccaggtgacactgaatttctgggaggagagccctggccccaaccacacccca
cagagtcttatcacagtgcagatggagcaggcctttgcccgacatttactggagaagact
ccagaggatcaggcagccatcctgtccctggtgcagagcctggaggacccagccccttct
cctctctctgttccacctatctgctttgagagagcctcttcctccacgctctcgacctgc
ctcccatgttactttgctccaggccccctgaacccaccagacatttctgcctcaggacct
ttgcacttgctggttcttttgactaaaacactcttccttcaggtcctaagcaccttaagg
gcaggtgcccccactttatcatatttgtgccccagcgtgaacgcttgtgaacactga
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