KEGG   Phocoena sinus (vaquita): 116748514
Entry
116748514         CDS       T07759                                 
Symbol
IRF9
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 9
  KO
K04693  interferon regulatory factor 9
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04217  Necroptosis
psiu04380  Osteoclast differentiation
psiu04620  Toll-like receptor signaling pathway
psiu04621  NOD-like receptor signaling pathway
psiu04625  C-type lectin receptor signaling pathway
psiu04630  JAK-STAT signaling pathway
psiu05160  Hepatitis C
psiu05162  Measles
psiu05164  Influenza A
psiu05165  Human papillomavirus infection
psiu05167  Kaposi sarcoma-associated herpesvirus infection
psiu05168  Herpes simplex virus 1 infection
psiu05169  Epstein-Barr virus infection
psiu05171  Coronavirus disease - COVID-19
psiu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    116748514 (IRF9)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    116748514 (IRF9)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    116748514 (IRF9)
   04621 NOD-like receptor signaling pathway
    116748514 (IRF9)
   04625 C-type lectin receptor signaling pathway
    116748514 (IRF9)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    116748514 (IRF9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    116748514 (IRF9)
  09172 Infectious disease: viral
   05160 Hepatitis C
    116748514 (IRF9)
   05171 Coronavirus disease - COVID-19
    116748514 (IRF9)
   05164 Influenza A
    116748514 (IRF9)
   05162 Measles
    116748514 (IRF9)
   05168 Herpes simplex virus 1 infection
    116748514 (IRF9)
   05167 Kaposi sarcoma-associated herpesvirus infection
    116748514 (IRF9)
   05169 Epstein-Barr virus infection
    116748514 (IRF9)
   05165 Human papillomavirus infection
    116748514 (IRF9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psiu03000]
    116748514 (IRF9)
Transcription factors [BR:psiu03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    116748514 (IRF9)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 116748514
NCBI-ProteinID: XP_032477547
Ensembl: ENSPSNG00000011742
LinkDB
Position
2:103687199..103694440
AA seq 478 aa
MASGRARCTRKLRNWVVEQVESGQFPGVCWEDAAKTMFRIPWKHAGKQDFREDQDAAFFK
AWAIFKGKYKEGDSEGPAIWKTRLRCALNKSSEFQEVPENGHRDGAEPYKVYRLLPPGTL
PAQPGTQKSPSKRHHSSVSSERKEDEVTTKNCILSPSLLQDPLKNELVETSGGTAYSDSG
SSSNSPEPQEGRDTAEAPLQGDLVSPELLPPPGSDYSLLLTFIYDGHVVGEAQVQSLDCR
LVAEPSVSQCGMEQVIFPKPGPREPTQRLLSQLKRGVLVASNSRGLFVQRLCPIPISWSA
PQAPPGPGPHLLPSNECVELFRTAYFCRDLARYFQGLGPAPEFQVTLNFWEESPGPNHTP
QSLITVQMEQAFARHLLEKTPEDQAAILSLVQSLEDPAPSPLSVPPICFERASSSTLSTC
LPCYFAPGPLNPPDISASGPLHLLVLLTKTLFLQVLSTLRAGAPTLSYLCPSVNACEH
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggcatcaggcagggcacgttgcacccggaagctccggaactgggtggtggagcaggtg
gagagtgggcagttcccaggagtgtgctgggaagatgcggccaagaccatgttccggatt
ccctggaagcacgcaggcaagcaggacttccgggaggatcaggacgccgccttcttcaag
gcctgggcgatatttaagggaaagtacaaggagggggactcggaaggccctgctatctgg
aagactcgtctgcgctgtgctctgaacaagagttctgagttccaggaggttcctgagaat
ggccacagggatggggctgagccctacaaggtgtaccggctgctgccacctggaaccctc
cccgctcagccagggacccagaaatcaccatcaaagcgacaccacagttctgtgtcctct
gagaggaaggaggatgaggttaccacgaagaactgcatactcagcccctccttgctccag
gaccccctcaaaaatgagctggtggagaccagcgggggaacagcctattcagactccggg
agcagcagcaacagccctgagcctcaggaaggtagggacacagctgaggcccctctccaa
ggagatctggtgtccccagagcttctgccccctccaggatcagactactctctgctgctc
accttcatctacgatggacatgtggtgggtgaggcccaggtgcagagcctggactgccgc
ctcgtggctgagccctcggtctcccagtgcggcatggagcaggtgatatttcccaaaccc
ggcccacgagagcccacccagcgcttgctgagccagctcaagagaggggtcctggtggcc
agcaactcccgaggcctctttgtgcagcgcctttgccccatccccatctcctggagcgcg
ccccaggctccacctggtccaggcccacacctgctgcccagcaacgaatgcgtggagctc
ttcagaaccgcctatttctgcagagacctggccaggtacttccagggcctgggccccgca
cccgagttccaggtgacactgaatttctgggaggagagccctggccccaaccacacccca
cagagtcttatcacagtgcagatggagcaggcctttgcccgacatttactggagaagact
ccagaggatcaggcagccatcctgtccctggtgcagagcctggaggacccagccccttct
cctctctctgttccacctatctgctttgagagagcctcttcctccacgctctcgacctgc
ctcccatgttactttgctccaggccccctgaacccaccagacatttctgcctcaggacct
ttgcacttgctggttcttttgactaaaacactcttccttcaggtcctaagcaccttaagg
gcaggtgcccccactttatcatatttgtgccccagcgtgaacgcttgtgaacactga

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