Phocoena sinus (vaquita): 116748557
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Entry
116748557 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116748557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116748557
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116748557
Membrane trafficking [BR:
psiu04131
]
SNARE
SNARE associated proteins
Others
116748557
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
116748557
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
116748557
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116748557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Suv3_N
Motif
Other DBs
NCBI-GeneID:
116748557
NCBI-ProteinID:
XP_032477590
LinkDB
All DBs
Position
2:62682105..62695352
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AA seq
595 aa
AA seq
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MVREKALDDRLRGLTLIPKATRSQKQVQDRRHCESSSDTCQRQGQWSAHCLKSERRLGCQ
DLINEEGWGQGLGWGDFGSLRSQAVEGSGTWSLEHGALVCTACAPTSRQAKLQGSARSGY
GQKRALWAGLTRVIKEEGRAEQQPWSTPPPDPERLLQPEPLELGHPDTGLESVASEEAVG
VRDEGPRNGTMTENNFWLKKIEINVSEAEKQTGRNAMNMQETYTAYLIETRSVEQIDGQS
VLADSLWRQXSEFELLRNYLLVYYPHIVVPPLPEEQAEFVWHKLSADNTDKDFMERQXIG
LENVLLRVASYPVLCRDIIFYLFLTQAGNWKETVNETGFQRKADCRLKAFNATFRGKNPD
KRCTELKHYSDELPSVIAYLLRVRARVADRLYGVYKVYGNYGRVFGEWSAIEKRMGDGLQ
GAAHHRDVYASSIDDILEDEEHYADQLKEYLFYAEAMHKMRAVCRKHELMQYDLEMAAQD
LASKQQQCDELAPGTLRTFSLKGMTTKLFGQETPEQRDARIKVLEEQINEGEQLNSKNLE
GREFVRNAWADIEHFKEQKNRDLKEALISYALMQISICKKGTEVWTNAEECFSKM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtcagagagaaggccttagatgacaggctaaggggactgaccttgattccgaaggca
actaggagccagaagcaggtccaggacaggcgccattgtgaaagcagctcagacacctgc
cagagacaaggccagtggtctgcccactgcctaaagagcgagaggaggttaggctgccaa
gacctgattaatgaggagggctggggccagggattgggatggggggacttcgggagcctc
aggagccaggccgtggagggcagtgggacatggtccctagagcacggggcgcttgtgtgc
acagcctgtgcccccacgagcaggcaggcaaagctgcaagggagtgcgaggtctggctat
ggacagaagcgcgcactgtgggcggggctgacgagagtcattaaggaggagggccgcgcc
gaacagcagccatggagcacgccacctcctgatcctgagcggcttttgcaacctgagccc
ctagagctgggccaccccgacactgggctggagtctgtggccagtgaggaagcggtgggg
gtccgggatgagggcccccggaatggcacaatgacagaaaataatttttggttgaagaag
atagaaattaatgtttcagaagcagaaaagcaaactggaagaaatgccatgaacatgcaa
gaaacatatactgcttacctcattgaaacaaggtcagttgaacagattgatggtcagagt
gtcctagcagactcactatggaggcagtagagtgaatttgagctgttgagaaactacctt
ttagtatactatccacatattgttgtaccacctctaccagaagagcaagcagaatttgtt
tggcataaactctctgccgacaacactgacaaggatttcatggaaagacaatgaattggt
ttagaaaacgtcctcttgagagttgcttcgtatcccgtcctctgtagagacataatcttc
tatttgtttttaacacaggcaggcaactggaaggagactgtgaacgaaacaggatttcag
cggaaggcagactgcaggttaaaagcgtttaatgcaacattcagagggaaaaacccagac
aagagatgtactgaactaaaacactacagtgatgaactaccgtctgtcatcgcatatctt
cttcgagtcagagcgagagtagcagatcgactgtatggtgtatataaagtatatgggaat
tacgggcgagttttcggtgagtggagtgccatagaaaaaaggatgggtgatggactgcag
ggtgctgctcatcatagggatgtgtatgcatcttctatcgatgatattttggaagatgaa
gaacattatgcggatcagttaaaggagtatcttttttatgcagaagccatgcataaaatg
cgggctgtgtgcaggaaacacgaacttatgcagtatgacttggagatggctgctcaggac
ttagcatccaagcagcagcagtgtgacgaactggcacctgggaccctgagaacattttct
ttgaagggaatgactaccaagctctttggtcaagaaactccagagcagagagacgccaga
ataaaggtgctagaagaacaaataaatgaaggagaacaacttaactctaaaaatctggaa
ggcagagaatttgtcagaaatgcttgggctgatattgaacacttcaaagaacaaaagaac
cgtgatttaaaggaggccctcataagctacgcactcatgcagatcagtatatgcaaaaag
ggaactgaagtttggaccaatgctgaggaatgctttagcaagatgtaa
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