Phocoena sinus (vaquita): 116748690
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Entry
116748690 CDS
T07759
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116748690 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116748690 (VTI1B)
Membrane trafficking [BR:
psiu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
116748690 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
OmpH
Fusion_gly
DUF745
DUF3958
DUF5616
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
116748690
NCBI-ProteinID:
XP_032477740
Ensembl:
ENSPSNG00000007684
UniProt:
A0A8C9BHP1
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All DBs
Position
2:complement(143879655..143906738)
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AA seq
232 aa
AA seq
DB search
MANSAASSEHFEKLHEIFRGLHEDLRGVPERLLGTAGTEEKKKLIRDFDEKQQEANETLA
EMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGGGGDMKYGTYAVEKE
HMNRLQPQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQREQLERTKSR
LVNTGENLSKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYRFFRKH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcagccgcctcctcagagcatttcgagaaactgcatgagatcttccgcggt
ctccatgaagacctacgaggggtgccggagcggctcctggggacggctgggacagaagag
aagaagaagttgatcagagattttgatgaaaagcaacaggaagcaaatgaaacgctggca
gagatggaagaggagctacgttatgcccccctatcttttcgtaaccctatgatgtctaag
cttcgaacctaccggaaggaccttgccaaactccatcgggaagtgagaagcacacctttg
acagccactcctgggggtggaggagacatgaaatatggtacatacgctgtagagaaggag
cacatgaatcggctacagcctcaaagggcattgcttctgcaaggcactgacagcctgaac
cgggccacccagagtattgagcgttctcatcggattgctgcagagactgaccagattggc
tcagaaatcatagaagaactgggggagcaacgtgaacagttggaacgtaccaagagtaga
ctggtaaacacaggtgaaaacttgagcaaaagtcggaagattctccgttcaatgtccaga
aaagtgacaaccaacaagctgctactttccattgtcatcttactggagctagccatcctg
ggaggcctggtttattacagattctttcgcaagcactga
DBGET
integrated database retrieval system
