Phocoena sinus (vaquita): 116748722
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Entry
116748722 CDS
T07759
Symbol
RBM23
Name
(RefSeq) probable RNA-binding protein 23 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116748722 (RBM23)
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
General mRNP proteins
116748722 (RBM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RSRP
RRM_5
Dsh_C
RRM_7
zf_UBZ
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
116748722
NCBI-ProteinID:
XP_032477869
Ensembl:
ENSPSNG00000018691
LinkDB
All DBs
Position
2:complement(102816889..102834441)
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AA seq
475 aa
AA seq
DB search
MIESFDFMSFLPCPLLSLPNGICVSATWYLVSFSWRTPQDEQQTNEVEKESPSNTTNSTS
CTGSSGSGTSGSSASGEAGRKKRSRSHSKSRDRKRSRSRDRHRRRSSRSRSRDRQRRHRS
RSWERRRSSESRSRDRRREDRVRYRSPPLATGRRYGHSKSPHFREKSPVREPVDNLSPEE
RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPL
AIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLYVGSLHFNITEDMLRGI
FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER
LDGGTDITFPDGDQDLDLGSACGRLQLMAKLAEGSGIQLPTTAAAAQAAALQLNGAVPLG
ALNPAALTALSPALNLASQAIASQCFQLSSLFTRQTMAQHSDWHMAVLEQSNKHL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgattgagagcttcgatttcatgagctttcttccttgtccacttctttctttgcccaat
ggaatctgtgtgtctgccacctggtaccttgtgtcattttcctggcgaacccctcaggat
gagcagcaaactaacgaggttgaaaaggagagccctagtaacaccaccaacagcaccagc
tgtaccggcagcagtggcagtggcaccagtgggagcagcgccagtggggaggcaggcagg
aagaagaggagtcggagccatagtaaaagcagggatagaaaacgcagtcgtagtcgagac
cgtcataggcggagaagcagtcggagccggagtcgagatcggcagcgtcgtcaccgcagc
cgtagctgggaacgtcgacgtagtagtgagtcacgaagtcgagaccgacgtcgtgaggat
cgtgtgcgctacaggagtccaccacttgccactgggcgtaggtatggacacagtaagagt
cctcatttccgggagaagagcccagtcagggagccagttgataatctgagtcctgaggag
cgggatgcccgcacggtgttctgtatgcagttagctgcccgcattcggcctcgagacctg
gaggactttttctcggctgttggcaaggttcgagatgtacgtatcatctcagatcggaac
tcacgtcgttctaagggcattgcctatgtggaattctgtgagatccagtctgtgccactt
gccattgggctgaccggacagcggctgctgggagtgcctatcattgtacaggcctcacag
gctgagaaaaaccgactggcagccatggccaacaacctgcagaagggcagtggtggacca
atgcgcctctacgtgggctccctgcacttcaatatcactgaggacatgctccggggcatc
tttgagccctttggcaaaattgataatattgtcctgatgaaggactcagatacaggccgc
tctaaaggttatggttttattacgttctctgactctgagtgtgcccgccgggccctggaa
cagttgaatggctttgagcttgctggtcggcctatgagggttggccatgtgaccgagcga
ctggatggtggcacagacatcacttttcctgacggagaccaggatctggatctgggatca
gcgtgtggacgtttgcagctcatggccaaattggcagaaggctctggaatccagctgccg
accactgctgctgctgcccaagctgctgccttgcaactgaatggagcagttcctttgggg
gccctgaacccagcggctttgactgctctgagtccggccctgaacctcgcctcccaggca
atcgcctcccagtgcttccagctttccagcctctttacccgccaaaccatggcccagcac
agtgactggcatatggcagtacttgagcagagcaacaagcatttgtag
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