Phocoena sinus (vaquita): 116748737
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Entry
116748737 CDS
T07759
Name
(RefSeq) left-right determination factor 2-like isoform X1
KO
K04668
left-right determination factor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04350
TGF-beta signaling pathway
psiu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116748737
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116748737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psiu04052
]
116748737
Cytokines and neuropeptides [BR:
psiu04052
]
Cytokines
Transforming growth factors (RSTK binding)
116748737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
116748737
NCBI-ProteinID:
XP_032477937
Ensembl:
ENSPSNG00000003871
UniProt:
A0A8C9B7B4
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Position
1:162941596..162945224
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AA seq
367 aa
AA seq
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MRPLWLCWALWALPLAGPGAALTEERVLGSLLRQLHLSEAPVLDEADVERLIIPAHVRAQ
YVALLQRSHGARSRGKRFSQSFREVAGRFLVSEVSSHLLVFDMEQRLPPHSELVQAVLRL
FQEPVPKAALRRHERLFPRSDRARITVQWLHVRDDGSNRTSLIDSRLVSIHESGWKALDV
TDAVNFWQQLRRPRQSLLLQVSVQREHLGPLASSAHTLVRFASQGPSGAGQREPQLELHT
LDLRDYGAQGNCDPKVPATEATRCCRREVYIDLQGMKWAENWVLEPPGFLAYECVGTCQQ
PPEPLTFRWPFLGPRQCIASETTSLPMIVSIPEGGKPRPQVVSLPNMRVQKCSCASDGAP
VPRKLEP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccctctggctctgctgggcgctctgggcgctgcccctggccggccccggggcg
gccctgaccgaggagcgggtcctgggcagcctgctgcggcagctgcacctcagcgaggct
cccgtcctggacgaggccgatgtggagaggctgatcatccctgcccacgtgagggcccag
tacgtggccctgctgcagcgcagccacggggcccgctcccgggggaagaggttcagccag
agcttccgagaggtggccggcaggttcctggtgtccgaggtctcctcgcacctgctggtg
ttcgacatggagcagcggctgccgccccacagcgagctggtgcaggccgtgctgcgcctc
ttccaggagccggtccccaaggccgcgctccgcagacacgagcggctcttcccgcgcagc
gaccgcgcccggatcaccgtccagtggctgcacgtccgcgacgacggttccaaccgcacc
tccctcatcgactccaggctggtgtccatccacgagagcggctggaaggccttggacgtg
acggacgccgtgaacttctggcagcagctgcgccggccccggcagtcgctgctgctgcag
gtgtcggtgcagcgggagcacctgggcccgctggcctccagcgcccacacgctggtccgc
tttgcctcgcaggggccgtcgggcgccgggcagcgggagccccagctggagctgcacacc
ctggacctcagggattacggagctcagggaaactgtgatcctaaggtaccagcgaccgag
gccacccgctgctgccgccgggaggtgtacattgacctgcaggggatgaagtgggctgag
aactgggtcctggagcccccaggcttcctggcctatgagtgtgtgggcacctgccagcag
cccccagagcccctgaccttcaggtggccatttctggggccgagacagtgcatcgcctca
gagacgacctcgctgcccatgattgtcagcatcccggagggaggcaagcccaggccccag
gtggtcagcttgcccaacatgagggtgcagaagtgcagctgtgcctcggatggggcgcct
gtaccaaggaagctggagccgtag
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