Phocoena sinus (vaquita): 116748784
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Entry
116748784 CDS
T07759
Symbol
FBH1
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116748784 (FBH1)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116748784 (FBH1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116748784 (FBH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
UvrD_C_2
F-box
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
116748784
NCBI-ProteinID:
XP_032478066
Ensembl:
ENSPSNG00000000814
LinkDB
All DBs
Position
2:complement(25463361..25509919)
Genome browser
AA seq
1066 aa
AA seq
DB search
MRRFKRKHLTAVDCQHLARSHLAVTQPFCQRWTNRDPNHGLYPRPRTKRGTRGRGCLGYN
PEFFLAGQQQRTNDMAKSNSVGQDSSKDSEDEMIFAAEGHCTLPQGGDGAVRPRSSGKRS
RSSEDERNQATGTSQWDGVSRKTPRHHLSLSCRQPREGRQEAEDGVSWFSAQPGESSQEV
EDIGPDPVPDAYYGLLGTSPCQEPQSHICSLPSEVLRHIFAFLPMEDLYWNLSLVCHFWR
EIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSSYGIEKESDLCVLNLIRYTATTKCSP
SVDPGRALWSLRDHLLLPEAEACVRQHLPDLYAAPAGVNVWALVAAIILLSSSVNDIQQL
LFCLRRPSSTVTMPDITETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQENSCAQAT
AVKEEPSVWPGKKTTIQLTHEQQLILSHKMEPLQVVKIMAFAGTGKTSTLVKYAEKWSES
RFLYVTFNKSIAKQAELVFPSNVICKTFHSMAYGHIGRKYQLKKKLNLFKLTPFMVNSVL
AEGKGGFIRAKLVCKTLENFFASADDELTIDHVPIWCKNSQGQRVMVEQSEKLNGVLEAS
RLWDNMRKLGECKEEAYHMTHDGTHAPSPEPRRGPSSFRFLTLVPLLVGYLKLWQLSKPL
LASFDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFY
LTQSFRFGVEIAYVGATILDVCKRVRKKTLVGGNHQSGIRGDTKGQVALLSRTNANVFDE
AVRVTEGEVPARIHLIGGIKSFGLDRIIDIWTLLQPEEERKRRNLVIKDRFIRRWVHREG
FSGFKRYVTAAEDKELEAKIAVVEKYNIRIPELVERIERCHIEDLDFAEYILGTVHKAKG
LEFDTVHVLDDFVKVPCARHNLAQLPHFRVESFSEDEWNLLYVAVTRARKRLIMTRSLEN
ILTLAGEYFLQAELTSNVLKTGVVRCCVGQCSNAIPMDTVLTMRKLPITYSNRKENKGGY
LCHSCAEQRIGPLAFLTASPEQVRAMDRTVENIVLPRHEALLFLVF
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagacggtttaagcggaagcatcttacagccgtcgactgccaacatctggctcgcagt
cacttggccgtgacccagcccttctgtcaaagatggacaaacagagacccgaaccacggt
ctctatcctagacccagaaccaaaagagggactagaggtcgaggatgcctgggatacaac
cctgaattcttcctcgctggccagcagcagcgcaccaatgacatggccaaaagcaattct
gtgggccaggacagctctaaggactcggaggacgagatgatttttgctgcagaaggccac
tgcaccctgcctcagggaggtgatggagcagtacggccacgctcgtcagggaagcggtct
cggtcctccgaggacgagaggaatcaagccacagggaccagtcagtgggatggggtttct
aggaagaccccacggcatcatctgtccctgtcgtgcagacagcccagggaaggcaggcag
gaggcagaggatggtgtgtcgtggttctctgcgcagcctggagaatccagccaggaggtg
gaggacattggtcctgatcctgttcctgacgcttactatgggcttcttgggacctcgccc
tgccaggaaccccagagccacatctgcagcctgcccagtgaggtcctgaggcacatcttt
gctttcctccccatggaagacctctactggaatctgagcttggtgtgccacttttggagg
gagataatcagtgatccactgttcattccttggaaaaaactgtatcaccgatacctgatg
aatgaagagcaagctgtcagcaaagtggatggcatcctctcgagctatggcatagagaag
gagtcagacctgtgtgtgctgaacctcatccgctacacagccaccactaagtgctccccg
agtgtggaccctggacgggcgttgtggagtctgagggatcacctcctcctccccgaggca
gaggcctgcgtgcgccaacacctccccgatctctacgctgcccctgccggtgtcaacgtg
tgggccttggtggcggccatcatcctcctgtccagcagcgtcaatgacatccagcagctg
ctcttctgcctccggcggcccagctccacagtgaccatgccagacatcactgagactctg
tactgcattgccgtgttgctctacgccatgagggagaaagggatcaacatcagcaaccgg
attcactacaacattttctattgcctgtatcttcaggagaattcctgtgctcaggccaca
gcagtcaaagaggaaccatcggtctggccaggcaagaaaacaaccatccagctgacacat
gaacaacagctgatcctaagccataagatggaacctctccaggtggtaaaaattatggca
tttgcaggcactgggaagacctccaccctggtcaagtacgctgagaagtggtctgagagc
aggtttctgtacgtgaccttcaacaagagcatcgccaagcaggccgagctcgtcttcccc
agcaatgtcatctgcaagaccttccactccatggcctatggacacatcgggcgcaagtac
caattgaagaagaagttgaatctcttcaagttaacccccttcatggtcaactctgtcctc
gctgaagggaagggtggcttcataagggccaagctagtttgtaagactctggaaaacttc
tttgcttcggctgacgacgagctgacgatcgaccacgtgcccatctggtgtaagaacagc
cagggacagagagtcatggtcgagcagagcgagaagctgaacggtgtcctcgaagcgagc
cgactttgggacaacatgcggaagctgggcgagtgcaaggaggaggcttaccatatgacg
cacgacggtacgcatgcgcccagtcctgagccccgccgtggaccctcctcattccgattt
ctgactcttgtgccccttcttgtaggctacttgaaactctggcagctcagcaagcctctg
ctggcctcttttgatgccatctttgtggacgaggcccaggactgtaccccagcgatcatg
aacatagttctgtctcagccatgtgggaaaatcttcgtgggggacccacaccaacagatc
tataccttccgaggtgcagtcaacgctctgttcacagtccctcacacgcacgtcttctat
ctcacacagagttttaggtttggtgtggaaattgcctatgtgggagctacaatcttggat
gtctgcaagcgagtaagaaaaaagactttggttggaggcaaccatcagagtggcattcga
ggtgacacgaaggggcaggtggccctgctgtcccggaccaacgccaacgtgtttgatgag
gccgtccgggtgacggaaggagaagtgcctgcccggatccacctgataggggggattaaa
tcatttggattggacagaatcattgatatttggacgcttcttcagccggaggaagaacgg
aagagacgaaacctcgtcattaaagacaggttcatcagaaggtgggtgcacagagagggc
ttcagtggcttcaagcggtatgtgactgcggccgaggacaaggagctggaagccaagatt
gcggtcgtggagaagtacaacatccggattccagagctggtggaaaggatagagagatgc
cacatagaggacttggactttgcagagtacatcttgggcactgtgcacaaggccaaaggc
ctggagtttgacactgtgcatgtcctagatgatttcgtgaaagtgccttgtgctaggcac
aacctcgctcagctgccccacttcagagtcgagtcgttttctgaggacgagtggaattta
ctgtatgtagcagtaactcgcgccaggaagcgtctcatcatgaccaggtcactggagaac
atcttgactttggctggggagtatttcttgcaagcagagctgacaagtaatgttttgaag
acaggcgtggtccgctgctgcgtggggcagtgcagcaacgccatccccatggacaccgtg
ctcaccatgcggaagctgcccatcacctatagcaacaggaaggaaaacaagggtgggtac
ctgtgccactcatgtgcggagcagcgcattgggccgctggccttcctgactgcctccccc
gagcaggtgcgcgccatggaccgcaccgtggagaacatcgtgctgccccggcatgaggcc
ctgctcttcctcgtcttctga
DBGET
integrated database retrieval system
