Phocoena sinus (vaquita): 116748797
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Entry
116748797 CDS
T07759
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116748797 (UBR1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116748797 (UBR1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
116748797 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
ATPase_2
Motif
Other DBs
NCBI-GeneID:
116748797
NCBI-ProteinID:
XP_032478104
Ensembl:
ENSPSNG00000004451
UniProt:
A0A8C9BH63
LinkDB
All DBs
Position
2:91260795..91445400
Genome browser
AA seq
1753 aa
AA seq
DB search
MAEEEAGDAERMEVSTELPQTPQRLASWWHQQIDFHTTFLNHLARLVPEIYFAEMEPDLE
KQEENIQMSIVTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCISHEPGRAGTTKENLRC
PLNEEVIAQARKIFPSVIKYIVEMTVWEEEKELPPQLQIREKNDSYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAFAACQEAKEDIKSHSENVSQHPLHV
EVLHSEVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPGSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKFFAMEFVKYYKQLQKDYISDDHDRSISITALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPAVWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFKSSSKTVVQLCGHTLETKSYRV
SEDLVSIHLPISRTLAGLHVRLSRLGAISRLHEFVPFEDFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELADA
FNKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEP
MPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKAVNLLNCDIMMYILRTIFEQAVD
PDSNLWTEGMLQMAFHILALGLLEEKQQLQKSPEEEVTFDFYHKASRLGSSAMNAQNIQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSESIKNDEITHDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDSTSEMSGKEDSIMEEESTPAVSDY
CKIALGPKRGPSVTEKEVLTCILCQEEQEVKLENNAMVLSACVQKSTALTQHRGKPIELS
GETVDPLFMDSDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPIIPLQPQRISSENTEALAQLLTLARWIQTVLARITGYNMKHAKGERPT
IPVLFDQGMGDSTFEFHSILSFGVQSSIKYSNSIKEMVLLFATTIYRIGLKVPPDETDPR
IPMMTWSTCAFTIQAIENLLGDERKPLFGALQNRQHNGLKALMQFAIAQRITCSQVLIQK
HLIRLLSVVLPNLKSEATPCLLSVDLFHVLVGTVLAFPSLYWDDAVDLQPSSISSSYNHL
YLFHLITMAHILQILLTTDTGLPLAQIQEESEEARSASSFLAEVSQYTSGCIGCGIPGWY
LWVSLKNGIIPYLRCAALFFHYLLGVTPPEELFTNPAEGEYSALCSYLSLPTNLFLLFQK
YWDTVRPLLQRWCTDPALLNCLKQKSAIVRYPRKRNSLIELPDDYSCLLNQASHFRCPRS
ADDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVV
LVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQE
TNQMLFGFNWQLL
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggaggctggggacgcagagaggatggaagtcagcacggagttgcctcag
actccacaacgactggcctcttggtggcatcagcaaattgattttcatactactttcttg
aaccatttggcacgattggtgccagaaatttattttgctgaaatggaaccagacttggaa
aagcaggaggagaatatacaaatgtcaatagtcactccactggaatggtacttatttgga
gaagatccagatatttgcttagagaaattgaagcacagtggagcatttcaactctgtggg
aaggttttcaaaagtggagagacaacatattcttgtagggactgtgcaattgatccaaca
tgtgtactctgtatggactgcttccagaatagtgttcataaaaatcatcgttacaagatg
catacttctactggaggaggattttgtgactgtggagacacagaagcatggaaaactggc
cctttttgtataagtcatgaacctggaagagcaggtaccacaaaagagaacttacgctgt
ccgttgaatgaagaggtaattgcccaagccaggaaaatattcccttcagtgataaaatac
attgtagaaatgactgtatgggaagaggaaaaagaactgcctcctcaactccagataaga
gagaaaaatgatagctactactgtgtccttttcaatgatgaacaccattcatatgaccat
gtcatatacagtctacaaagagctcttgactgtgagctcgcagaggcgcagttgcacacc
actgccatagacaaagagggccgtcgggctgttaaagcaggtgcttttgctgcttgccag
gaagcaaaggaagatataaagagtcattcagaaaatgtctctcaacatccacttcatgta
gaagtattacactctgaggttatggctcatcagaaatttgctttgcgtctggggtcctgg
atgaataaaattatgagctattcaagtgacttcagacagatcttttgccaagcatgcctt
agagaagaacctggctctgagaatccctgtctcataagcaggttaatgctttgggatgca
aagctttataaaggtgcccgtaagatccttcacgaattgatcttcagcagtttttttatg
gagatggaatacaaaaaattctttgctatggaatttgtgaagtattataagcagctacag
aaagactatatcagtgatgatcatgacagaagtatctctataactgcactctcagttcag
atgtttactgttcctactttggctcgacatcttattgaagagcaaaatgttatctctgtc
atcactgaaactctgctggaagttttgcctgagtacttggataggaacaataaattcaac
ttccagggttatagccaggacaaattgggaagagtatatgcagtaatatgtgatctaaag
tatatcctcatcagcaagcccgcagtgtggacggaaagattaagaatgcagttccttgaa
ggctttagatcttttttgaagattcttacctgtatgcagggaatggaagaaatcagaaga
caggttgggcaacacatagaagtggatcctgactgggaggctgccattgctatacagatg
caattgaagaacattttactaatgttccaagagtggtgcgcttgtgatgaggaactatta
ctggtggcttataaagaatgtcataaagctgtgatgaggtgcagtacaagtttcaaatct
agtagcaaaacagtagtacaattgtgtggtcatactttggaaactaaatcctacagagta
tctgaagatcttgtaagcatacatctgccaatctctaggactcttgctggtcttcatgtg
cgtttaagcaggctgggtgctatttcaagactgcatgaatttgtgccttttgaggatttt
caagtagaggtactagtggaatatcctttgcgttgtctggtattggttgcccaggttgtt
gctgagatgtggcgaagaaatgggctgtctctcattagccaggtgttttattaccaagat
gttaagtgcagagaagaaatgtatgataaagatatcattatgcttcagattggtgcatct
ttaatggatcccaacaaattcttattactggtacttcagaggtatgaacttgctgatgct
tttaacaagaccatatccacaaaagaccaggatttgattaaacaatataataccttaata
gaagaaatgcttcaagtcctcatctatattgtgggagagcgttatgtccctggagtggga
aatgtgaccaaagaagaggtcacaatgagagaaattattcacttgctttgtattgaaccc
atgccacacagtgccattgccaaaaatttacctgagaatgaaaataatgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccaggtgtatcaggacatggagtt
tatgagctgaaagatgaatcattgaaagacttcaatatgtacttttatcattactcgaaa
acacaacatagcaaggctgaacatatgcagaagaaaaggagaaaacaggaaaacaaagat
gaagcattaccaccacctcctcctcctgaattctgccctgctttcagcaaagcagttaac
cttctcaattgtgatatcatgatgtacattctcaggaccatatttgagcaggcagtagac
ccagattctaacttgtggaccgaagggatgctccagatggcgtttcatattctggcattg
ggcttactagaagaaaagcaacagcttcaaaaatctcccgaagaagaagtgacatttgac
ttttaccataaggcctcaagattgggaagttcagccatgaatgctcaaaatatacaaatg
cttttagaaaaactcaagggaattccccagttagaaggccagaaggacatgattacatgg
atactccagatgtttgacaccgtgaagcgattaagagaaaaatcttgtttaattgtagca
actacatcaggatcagaatctattaaaaatgatgagattactcatgataaagaaaaagca
gaacgaaaaagaaaagctgaagctgctaggcttcatcgccagaagatcatggctcagatg
tccgccttacagaagaactttattgaaactcacaaactcatgtatgacagtacgtcagaa
atgtctgggaaagaagactccattatggaggaagagagcaccccagcagtcagtgactac
tgtaaaattgctttgggtcctaaacggggtccgtctgttactgaaaaggaggtgctgaca
tgcatcctctgccaagaagaacaagaggtgaagctagaaaataatgccatggtattatcg
gcctgtgtccagaaatccaccgccttaacccagcacaggggaaaacccatagaactctca
ggggaaaccgtggacccacttttcatggattcagacttggcatatggaacttacacagga
agctgtggtcatgtaatgcatgcagtgtgctggcagaagtattttgaagctgtacagctg
agctctcagcaacgcattcatgttgacctttttgacttagagagtggagaatatctttgc
cctctttgcaagtccctgtgcaatactgtgatccccattattcctttgcaacctcaaagg
ataagcagtgagaatacagaagctcttgctcaacttttgaccctggcacgatggatacag
actgttctggccagaataacaggttataatatgaaacatgctaaaggagaaaggccaaca
attccagtcttgtttgatcaaggaatgggtgattccacttttgagttccattctattctg
agttttggagttcagtcttcgataaaatattctaatagcatcaaggaaatggtccttctc
tttgccacaacaatttatagaattggattgaaagtgcctcctgatgaaacggatcctcga
atccccatgatgacctggagcacatgtgctttcactatccaggcaattgaaaacctcttg
ggagatgaaagaaaacctttgtttggagcacttcaaaatagacagcataatggtctaaaa
gcattaatgcagtttgccattgcacaaaggattacctgttctcaggtcctgatacagaaa
catctgattcgtcttctatcagttgttcttcctaacctaaaatcagaagctacaccttgc
cttctatctgtagatctatttcatgttttggtgggtactgtgttagcattcccatccttg
tattgggatgatgctgttgatctgcagccttcatcaattagttcttcctataaccacctt
tatctcttccatttgatcaccatggcacacattcttcagatacttctaaccacagacaca
ggtctcccccttgcacaaattcaagaagagagtgaagaggctcgttctgcatcttctttc
ttggcagaagtttctcagtatacaagtggctgcattgggtgtggtattcctggctggtat
ttatgggtctcgttgaagaatggcatcatcccttatcttcgctgtgctgcattgtttttc
cactatttacttggagtaactccacctgaagaactgtttaccaatcctgcagaaggagag
tacagtgcactctgtagctatttatctttacccacaaatttgttcctgcttttccagaaa
tattgggatactgtaaggcccctcctgcagagatggtgtacagaccctgccttactaaac
tgtctgaagcaaaaaagcgccatagtcaggtaccctagaaaaagaaatagtttgatagag
cttcctgatgactatagctgcctcctaaatcaagcttctcatttcaggtgcccacggtct
gcagatgacgagcgaaagcaccctgtcctctgtcttttctgtggagccatactgtgttct
cagaacatttgctgccaagaaattgtgaatggggaagaggtgggagcttgcatttttcat
gcccttcactgtggagctggagtctgcattttcctaaaaatcagagaatgtagagtagtc
ctggttgaaggtaaagccagaggctgtgcctatccagccccttatttggatgaatatgga
gaaacagaccctggcctgaagaggggcaacccccttcatttatctcgtgagcggtatcgg
aagctccatttggtgtggcagcaacactgcatcatagaagagattgctaggagccaggaa
acgaatcagatgttattcggattcaactggcagttactgtga
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integrated database retrieval system
