Phocoena sinus (vaquita): 116748828
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Entry
116748828 CDS
T07759
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116748828 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116748828 (RPAP2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116748828 (RPAP2)
Protein phosphatases and associated proteins [BR:
psiu01009
]
HAD phosphatases
Fcp/Scp phosphatases
116748828 (RPAP2)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116748828 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
116748828
NCBI-ProteinID:
XP_032478175
Ensembl:
ENSPSNG00000015762
UniProt:
A0A8C9C979
LinkDB
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Position
1:82261382..82346305
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AA seq
611 aa
AA seq
DB search
MADWVGKCSAGRKARGPRASRNVAGTKQTSALKQEDASKRKAELEAVVRKKIEFERKALR
IVEQLLEENITEEFLRECGKFITPAHYSDVVDERSIIKLCGYPLCRKKLGIVPKQKYKIS
TKTNKVYDITERKCFCSNFCYKASKFFKAQIPKTPVWVREEERCPDFQLLQEGQSGHSGE
EIQLCSKAIKTSDVDSPGHFEKHDESSSSGTHSDSSSDNEQDFVSSILQGNRPSATGIRP
QLHKKSIMKKKAGQKVNSKHESKEQTVIDVTEQLGNYRLDSEEKAAACELPLQNVYTQIS
SNRSLQEKLEASKISENKYSSSKITLVGISKKSAEHFKRKFAKLNQVSRSASSSVQVCPE
VAKANLLKALKETLIEWKTEETLRFLYGQNYASVCLKPSSAPLVKEEELDEDDVNCDPDS
HSPALQESQNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGRYVLNEETT
KSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLSKILPGLMGPLQITLGDVYTQLKNLVRT
FRLTNRNIIHKPAEWTLIALVLLSLLTSILGIQKHSQENVMFTQFLTTLLEELHLKNEDL
ESLTIIFRTSC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccgactgggtcgggaagtgctctgccggccgtaaggcccggggtcctcgcgcctcc
cgaaacgtcgcaggtactaagcagacaagtgccttgaaacaagaagatgcttctaaaagg
aaagccgaactagaagcagttgtcagaaagaagattgagtttgagagaaaagctctacgt
attgttgaacagcttttagaagagaatattacagaagaattcctaagggagtgtgggaag
ttcatcacacctgctcattatagtgatgttgtggatgagcgttctattatcaaactctgt
ggctatcccttatgtcggaagaagctaggaattgtaccaaaacagaaatataaaatttct
accaaaaccaataaagtctatgatattactgaaagaaagtgtttttgcagcaatttttgt
tataaagcatcgaaatttttcaaagcacaaattcctaaaactccagtgtgggttcgagaa
gaagaaagatgtcctgattttcagctgctacaggaaggacaaagtggtcattctggagaa
gaaatacagttatgcagtaaggccattaaaacatcagatgttgacagtcctggccatttt
gagaagcatgatgaatctagttcttctggcactcacagtgatagtagcagtgataacgag
caagactttgtttcctccattctacaaggaaacagaccaagtgcaacgggtataaggcca
cagctgcacaaaaaaagcataatgaaaaagaaagctggtcaaaaggttaactccaaacat
gaaagcaaagaacagacagtaatagatgtcactgagcagttaggcaattacagattagac
agtgaggagaaagctgctgcttgtgaacttcctttacagaatgtatatactcagatttct
tcaaataggtctctgcaagaaaaattagaagcttcaaaaatttctgaaaataaatacagt
agttcaaaaataactcttgtaggcataagtaagaaaagtgctgagcattttaagaggaaa
tttgccaaattgaaccaagtttctaggtcagcttctagttcagtgcaggtgtgccctgaa
gttgcaaaggcaaacttacttaaagccctgaaggagactttgattgagtggaagacagaa
gaaactttgaggtttttgtatggccagaattatgcttccgtatgtctgaaaccctcttca
gcccctctggttaaggaagaagaacttgatgaagatgatgtgaactgtgacccagacagt
cattcccctgccttgcaggaatctcagaacagcttggatgagtctttaccatttagagcc
tcagatacagccattaaaccactgccaagttatgagaacttgaaaaaagaaactgaaaca
ttaaatctaaggatcagggagttttatagaggacgatatgttttgaatgaagaaaccacc
aaatcacaagactcggaagagcatgatcccacctttccactgatagattcaagttctcag
aaccagattagaaaacgcatcgtacttgaaaaattgagtaaaatattgcctggacttatg
gggcctcttcagattacattaggagatgtttacacacaacttaaaaatcttgtccgaact
ttcagattaacaaacagaaatattatacataaacctgcagagtggaccttaattgctttg
gtgttgctgtcattactgacctcaattcttggcattcagaagcattctcaggaaaatgta
atgtttacacagtttttgaccaccctgcttgaagaattacacttaaagaatgaagacctt
gaaagtttaaccatcatatttagaaccagctgttaa
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