Phocoena sinus (vaquita): 116748866
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Entry
116748866 CDS
T07759
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04066
HIF-1 signaling pathway
psiu04137
Mitophagy - animal
psiu04140
Autophagy - animal
psiu04148
Efferocytosis
psiu04659
Th17 cell differentiation
psiu04919
Thyroid hormone signaling pathway
psiu05167
Kaposi sarcoma-associated herpesvirus infection
psiu05200
Pathways in cancer
psiu05205
Proteoglycans in cancer
psiu05208
Chemical carcinogenesis - reactive oxygen species
psiu05211
Renal cell carcinoma
psiu05230
Central carbon metabolism in cancer
psiu05231
Choline metabolism in cancer
psiu05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
116748866 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116748866 (HIF1A)
04137 Mitophagy - animal
116748866 (HIF1A)
04148 Efferocytosis
116748866 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116748866 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116748866 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116748866 (HIF1A)
05205 Proteoglycans in cancer
116748866 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
116748866 (HIF1A)
05230 Central carbon metabolism in cancer
116748866 (HIF1A)
05231 Choline metabolism in cancer
116748866 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
116748866 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
116748866 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
116748866 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116748866 (HIF1A)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116748866 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
116748866
NCBI-ProteinID:
XP_032478280
Ensembl:
ENSPSNG00000011918
UniProt:
A0A8C9C6D2
LinkDB
All DBs
Position
2:138386466..138428001
Genome browser
AA seq
823 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DEQQLEEVPLYNDVMLPSSNEKLQNINLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSTTPQSASTITVFQ
PTQMQEPPITTNTTTATTDELKTVTKDGMEDIKILIAFPSPPHVPKETTCATTSPYSDTG
SRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTVPEEELSPKILALQNAQRKRKIE
HDGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLL
GQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagag
aagtctagagatgcagccagatctcgacgaagtaaagagtctgaggttttttatgagctt
gctcatcagttgccacttccccataatgtgagctcacatcttgataaggcttctgttatg
aggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgcttttatttgaaagccttggacggttttgtt
atggttctcacagatgatggtgacatgatttacatttcggataatgtgaacaaatacatg
gggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgcgac
catgaggaaatgagagaaatgcttacacacagaaatggccttgtgaaaaagggtaaagag
caaaatacacagcggagcttttttctcagaatgaagtgtaccctaactagccggggaaga
actatgaacataaagtctgcaacatggaaagtacttcactgcacaggccatattcatgta
tatgataccaatagtaaccaatctcaatgtgggtataagaaaccacctatgacatgcttg
gtgctgatttgtgaacccattcctcatccgtcaaatattgaaattcctttagacagcaag
acttttctcagtcgtcacagtctggatatgaagttttcttattgtgatgaaagaattaca
gaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatattatcat
gctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgccaaaagaggtggctatgtctgggttgaaactcaa
gcaactgtcatatataacactaagaactctcaaccacagtgcattgtatgtgtaaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
ctcaaaccagttgaatcttcagacatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagtagtctctttgataaacttaagaaggaacctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagattttggcagcaatgacacagaaact
gatgaacaacaacttgaggaagttccattgtataatgatgtaatgctcccctcatccaat
gagaaattacagaatataaatttggcaatgtctccattacctgcctctgaaactccaaag
ccacttagaagtagtgctgaccctgcactcaatcaggaagttgcattaaagttagaacca
aatccagagtcactggaactttctttcaccatgccccagattcaagatcagccagctagt
ccttctgatggaagcaccagacaaagttcacctgagcctaacagtcccagtgaatattgt
tttgatgtggatagtgatatggtcaatgaattcaagttggaattggtagagaaacttttt
gctgaagacacggaagcaaagaatccattttccactcaggacactgatttagacttggag
atgttagctccttatatcccaatggatgatgacttccagttacgttccttcgaccagttg
tcaccattggaaagcagttctactactcctcaaagtgcgagcacaattacagtattccag
ccgactcaaatgcaggaacctcctataaccaccaacacaaccacagccaccactgatgaa
ttaaaaacagtgacaaaagatggtatggaagacattaaaatattgattgcatttccatct
cctccccacgtacctaaagaaactacttgtgccacaacatcaccatatagtgacactgga
agtcggacagcctcaccaaacagagcaggaaaaggagtcatagaacagacagaaaaatct
catccaagaagccctaatgtgttatctgtcgctttgagtcaaagaactactgttcctgag
gaagaactaagtccaaagatactagctttgcagaatgctcagagaaagcgaaaaatagaa
catgatggctcactttttcaagcagtaggaattggaacattattacagcaaccagatgat
cgtgcaactactacatcactttcttggaaacgcgtaaaaggatgcaaatctagtgaacag
aatggaatggagcaaaagacaattattttaataccctctgatttagcatgtagactgctg
gggcaatcaatggatgagagtggattaccacagctgaccagttatgattgtgaagttaat
gctcctatacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggat
caagttaactga
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