Phocoena sinus (vaquita): 116749075
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Entry
116749075 CDS
T07759
Symbol
RGMA
Name
(RefSeq) repulsive guidance molecule A
KO
K23096
repulsive guidance molecule A
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04350
TGF-beta signaling pathway
psiu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116749075 (RGMA)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116749075 (RGMA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
116749075
NCBI-ProteinID:
XP_032478936
Ensembl:
ENSPSNG00000004118
LinkDB
All DBs
Position
2:complement(44346642..44390906)
Genome browser
AA seq
454 aa
AA seq
DB search
MQPPRERLVVTGRAGWMGMGRGAGPSALGFWPTFAFLLCSFPAATSSCKILKCNSEFWSA
TAGSHAPAPDDAPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
TSQPHLRTLPPPPGDSQERSDSPEICHYEKSFHNRAAAPNYTHCGLFGDPHLRTFTDRFQ
TCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDEL
PAAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGGYLTFAVRMPEE
VVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRAGAESPGAHRLPAASPAPSAPDTFPYET
AVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRE
PPGRAAAAGLPPAPWPLLGSLLLLPLLPVLLEAT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccaagggagaggctagtggtaacaggccgagctggatggatgggtatgggg
agaggggcaggaccttcagccctgggattctggccgaccttcgccttccttctctgcagc
ttccccgcagccacctcctcgtgcaagatcctcaagtgcaactctgagttctggagcgcc
acggcgggcagccacgcaccggccccggacgacgcccccgagttctgcgcggcgctgcgc
acctatgccctgtgcacgcggcgcacagcccgcacctgccggggggacctggcctaccac
tctgccgtccatggcatcgaggacctcatgagccagcacaactgctccaaggatggcccc
acgtcgcagccgcacctacgcacgctgccgccgccaccgggggacagccaggaacgctcg
gacagccccgagatctgccactacgagaagagcttccacaatcgcgcggccgcccccaac
tacacgcactgcggcctcttcggagacccgcacctccggactttcacagaccgtttccag
acctgcaaggtgcagggcgcctggccgctcatcgacaataattacctaaacgtgcaggtc
accaacacaccggtgctgcctggctcagccgccaccgccaccagcaagctcaccatcatc
ttcaagaacttccaggagtgcgtggaccagaaggtgtaccaggccgagatggacgagctc
cctgccgccttcgccgacggctccaagaacggcggcgacaagcacggggccaacagcctg
aagatcaccgagaaggtgtcgggccagcacgtggagatccaggccaagtacatcggcacc
accatcgtggtccgccaggtgggtggctacctgactttcgcggtccgcatgcccgaggag
gtagtcaacgccgtggaagaccgggacagccagggcctctacctctgcctgaggggctgc
ccactcaaccagcagatcgacttccaggccttccgagccggcgccgagagccccggcgcc
cacaggctaccagccgccagccccgccccctcagcccccgacaccttcccatacgagacg
gccgtggccaagtgcaaggagaagctgcccgtggaggacctctactaccaggcctgcgtc
ttcgacctgctcaccacaggagacgtgaacttcacgctggccgcctactacgccctggag
gacgtcaagatgctccactccaacaaggacaagctgcacctgtacgagaggactcgggag
ccgccgggccgggcggccgccgcagggctgcccccggccccctggcccctcctcggcagc
cttctactcctgcccctgcttcctgtgctgctggaggccacctag
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