Phocoena sinus (vaquita): 116749081
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Entry
116749081 CDS
T07759
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116749081 (SIX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116749081 (SIX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116749081 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Rrn6_K-rich
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
116749081
NCBI-ProteinID:
XP_032478946
Ensembl:
ENSPSNG00000011343
UniProt:
A0A8C9BUI5
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Position
2:complement(137362343..137368458)
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMSH
ARSSNYSLPGLTASQPTHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccatcgttcggcttcacgcaggagcaagtggcgtgcgtatgcgaggtt
ttgcagcaaggcgggaacctggagcgtctgggcaggttcctgtggtcgctgcccgcctgc
gaccacctgcacaagaacgaaagcgtgctcaaggccaaggccgtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgcctcacaaccac
cccaagctgcagcaactgtggctgaaggcgcactacgtggaggccgagaagttgcgcggc
cggcccttgggcgcggtgggcaaatatcgggtgcgccgaaaattcccgttgccgcgcacc
atctgggacggcgaagagaccagctactgcttcaaggagaagtcgcggggcgtgctgcgg
gagtggtacgcgcataacccctacccctcgccgcgtgagaagcgggagctggccgaggcc
accggcctcaccaccacccaagtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacactgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaagaattc
tcacctccccaaagtccagaccagaactcggtccttctgctgcagggcaatatgagccac
gccaggagctcaaactattctctcccaggtttaaccgcctctcagcccacccacggcctg
caagcccaccagcatcagctccaggactctctgctgggccccctcacctccagtctggtg
gacttggggtcctaa
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