Phocoena sinus (vaquita): 116749168
Help
Entry
116749168 CDS
T07759
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116749168 (LCMT2)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
116749168 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
116749168 (LCMT2)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116749168 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_3
Kelch_2
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
116749168
NCBI-ProteinID:
XP_032479133
LinkDB
All DBs
Position
2:91057872..91060119
Genome browser
AA seq
686 aa
AA seq
DB search
MGPRSRERRAGAVQSTNDSSAVSKTSLAARGYVHDTFAALLVPGTARRAPLIHRGYYVRA
RAVRHCVRAFLKGTCAVPGAPRAQIVSLGAGSDSLYFRLKTAGRLTRAAVWEVDFPDVAQ
RKAQRIRDTPELCALTGPFQSGDPGYTLCFESSDYCILGLDLRQLQRLDHALGTAGLDAA
APTLLLAEAVLTYLEPDDAAALIAWAAQRFSNALFVVYEQMRPRDAFGEFMQQHFRQLNS
PLHGLDRFPDAEAQQQRFLQAGWTACRAMDMNEFYRCFLPAEERRRVENLETFDEFEEWH
LKCAHYFILAASRGDALSQTLVFPPSETFPRIDPPSPSGIFPASVVTGDSQGPHLKRYGH
ASVLLSPGLILSAGGFGEQEGRHCRVRKFHLLSRYCDFEWKGNQICSWGIGAQWDGRLYH
TMTRLSDTQVLVLGGRLSPLTPALGILQLLFCKSEDNNPEDLNVTVTKVGPEEDSTLSCW
RHSTTEVSYENQRYLFVYGGRSVAEPVLRDWHFLHVGTMAWVRIPVEGEVPEGRHSHSAC
SCQGGALIAGGLGASEEPLSSVFFLKPVSCGFIWESIAIQPPITPRYSHTAHVVNGKLLL
VGGVWIHSSSVPGVTVIDLSTGLSFEYQIDTTCVPWPLMLHNHTSILLPEEQQLLLLGGG
GNCFSFGTYFNPCTVTLDLSSLSARQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcggagccgcgagcgtcgggccggggcagtgcagagcaccaacgacagcagc
gccgtcagcaagacctctctggctgcgcgcgggtacgtgcacgacaccttcgccgccttg
ctagttccaggtaccgcgcgccgcgcgccgctcatccaccgcggctactacgtccgcgca
cgcgctgtgcggcattgcgtgcgcgccttcctgaaggggacgtgcgcggtccccggcgcg
cctcgcgcccagatcgtgtcgctcggcgctggctcggactcgctgtattttcgcctcaaa
actgcgggccgcctgacccgggctgccgtctgggaggtcgattttccggacgtggcacag
cgcaaagcgcagaggattcgagatacgccggaactgtgtgcgttaaccgggcctttccag
agcggggaccccgggtacacgttgtgctttgagagctcggactactgtatcctgggcctg
gacttgcggcagctgcagcgattggaccacgccttgggcaccgcgggccttgacgcagcc
gcaccgactctgctcctggctgaggctgtgctgacctacctcgagccggatgatgccgcg
gccctcatcgcctgggccgcacagcgtttttctaatgcccttttcgtcgtctacgagcag
atgaggccacgtgacgcctttggcgagttcatgcagcaacattttcggcagttgaattct
cccctgcatggcctggatcgctttcccgacgcggaagcccagcagcagcgcttccttcag
gccggctggaccgcctgccgtgccatggacatgaatgagttctatcgctgctttcttccc
gcagaagaacgccggcgcgtggaaaatctcgaaactttcgatgagtttgaggagtggcat
ctgaagtgcgcccactatttcattctggccgcttctcggggagacgccctctcccaaact
ctggtgtttccaccctcagagacgtttcctcggatagatcctccttccccttcaggaatc
ttccctgccagtgtagtcactggtgatagccagggcccacaccttaagagatatggccac
gcctcggtccttttgagcccaggtcttattctcagtgctggaggatttggagagcaggag
gggcgacattgccgagtgagaaagtttcacttgctctcaagatactgtgactttgaatgg
aaaggcaaccaaatatgcagttgggggattggagctcagtgggatggacgcctttatcac
accatgacaagactttcagatactcaggttctggttctgggagggagactgtccccatta
actccagccttggggattctccagcttcttttttgcaagagtgaggataataaccctgag
gacctaaatgtcacagtcacaaaggtcggcccagaagaagattccactttgtcatgttgg
cgccactcaacaacagaagtgtcctatgagaatcagagatatttgtttgtgtatgggggc
cgcagtgtggccgaacctgtactaagggactggcatttcctacatgtggggacaatggct
tgggtcaggatcccagtggagggagaagtacctgaaggtcggcattcccacagtgcctgc
agctgtcaagggggagccctcattgctggaggtctaggtgcttctgaggagccgttgagc
tctgtattctttctgaaaccagtctcttgtggattcatctgggaatcaatagccatccag
cctcccattaccccaaggtactcccacacagctcatgtggtcaatgggaagcttttgttg
gttggaggggtctggattcattcctcctcagttcctggagtgactgttattgatttgtct
acaggactgagcttcgagtatcagattgacacaacatgtgtgccatggccgttaatgtta
cacaatcataccagcattctccttcctgaagagcaacagctcctgctccttggaggtggt
gggaactgcttttcttttggtacctacttcaacccctgtacagtgacattagacctttct
tccttaagtgcaaggcagtaa
DBGET
integrated database retrieval system
