Phocoena sinus (vaquita): 116749175
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Entry
116749175 CDS
T07759
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116749175 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116749175 (LRFN5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
DUF240
LSR
Motif
Other DBs
NCBI-GeneID:
116749175
NCBI-ProteinID:
XP_032479147
Ensembl:
ENSPSNG00000011447
LinkDB
All DBs
Position
2:119933099..120198583
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AA seq
719 aa
AA seq
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MEKFLFYLFFIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTIKDTGAFTCIAS
NPAGEATQMVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASTSNGDTKISQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEDDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVCSQTNGAQIQGCSVTLPQSMSKQAVGHEENA
QCFKVANDNVIQCSETCSSQDSSTTTSALPPTWTSSTSVSQKQKRKTGTKPSTEPQSEAV
TNVESQNTNRNNSTALQLASRPPDSGTEGPTSKRAHSKPNALPTNVDQTVQETQRPELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcttttttatctgtttttcattggcatagcagtgaaagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttttgtttgtgccaccaaacattgacagaagaactgtggaactgcgtttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacacctcatgcttttgctgacttacggaat
ctgagggcattgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
gggctttccaatctccatcatttgatactgaacaacaatcagctgactttaatttcttct
acggcatttgatgatgtctttgccctcgaggagctggatctgtcctataataatttagaa
acaataccatgggatgctgttgagaagatggttagcttgcacaccctcagtttggatcac
aatatgattgataacattcctaaggggactttctcccacttgcacaagatgactcggcta
gatgtaacatcaaataaattacagaagctaccacctgaccctctctttcagcgagctcag
gtcctagcaacctcaggaatcataagcccatctacttttgcattaagttttggtggaaac
cctttgcattgcaactgtgaattgctgtggttgaggcgtctgtccagagaagatgacctg
gagacctgtgcttccccagcacttttaactggccgctatttttggtcaattcctgaggaa
gagtttttgtgtgagcctcctctcattactcgtcatacacatgagatgagagtcctggag
ggtcagagggcaaccctgaggtgcaaagccaggggagaccccgaacctgcaattcactgg
atttctcctgaagggaagcttatttcaaatgcaacaagatctctggtgtatgataatgga
acacttgacattcttataacaactattaaggatacaggagcttttacctgcattgcttcc
aatcctgctggggaagcaacacaaatggtggatcttcatataattaagctccctcactta
ctaaacagtacaaaccatatccatgagcctgatcctggttcttcagatatctcaacttct
actaagtcaggttctaatgcaagcactagtaatggtgatactaaaatcagtcaagataaa
attgtggtggcagaagcaacatcatctacggcactgcttaaatttaattttcaaagaaat
atcccgggaatacgtatgtttcaaatccagtacaatggtacttatgatgacacccttgtt
tacagaatgatacctcctacgagcaaaacttttcttgtcaataacctggctgctggaact
atgtatgacttgtgtgtcttggcaatatatgatgatggcattacttccctcactgccaca
agagtcgtgggttgcatccagtttactacggaagacgattatgtgcggtgccatttcatg
cagtcccagtttttgggaggcaccatgattattattattggtggaatcatcgtagcctct
gtgctggttttcatcatcattctaatgatccggtataaggtttgtaacaataatgggcaa
cacaaggtcaccaaggtcagcaatgtctgctctcaaactaatggggctcaaatacaaggc
tgcagtgtgacgctgccccagtccatgtccaaacaagctgtaggacacgaagagaatgcc
cagtgttttaaagttgccaatgacaatgtgatacaatgttcagaaacttgttcaagtcag
gactcctctaccactacctctgctttgcctcctacctggacttcaagtacttctgtgtcc
caaaagcagaaaagaaagactggcacgaagccaagtaccgaaccacagagtgaagctgtc
acaaatgttgagtcccaaaatactaacaggaacaactcaactgccttgcagttagctagt
cgacctcctgattctggcacagagggacccacatctaaaagagcacattcaaagccaaat
gctttgccgactaatgttgaccagactgtccaggagacacagaggccggagttaatctga
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