Phocoena sinus (vaquita): 116749181
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Entry
116749181 CDS
T07759
Symbol
DCAF4
Name
(RefSeq) DDB1- and CUL4-associated factor 4 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116749181 (DCAF4)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116749181 (DCAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
ASA1
Beta-prop_WDR3_2nd
WDR55
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_NOL10_N
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_VPS8
PAC11
Beta-prop_SPT8
DSE1_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
116749181
NCBI-ProteinID:
XP_032479160
Ensembl:
ENSPSNG00000013330
UniProt:
A0A8C9CBB1
LinkDB
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Position
2:148768623..148798404
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AA seq
495 aa
AA seq
DB search
MHKSRGQSRRHGRRSHRHNPWFRQHGSKERNNTRVQQSPQGSSHSDDEAPSTSSSTAGSS
SVPDLPGYYFDPEKKRYFRLLPGHNNCNPLTKESIRQKEMESKRLQLLEEEDKQGKKTAR
LGFNASSLLQKSKLGFLNVTSYCRLAHELRVSCMQRKKVQVQSSDPSALASDRFNLILAD
TNSDRLFTVNDVKVGGSKYGIINLRGLKTPTLRVHMHENLYFTNRKVNAVSWASLNHLDS
HILLCLMGIAETPGCATLLPASLFVSSHPAGDRPGMLCSFRIPGAWSCAWSLNIQANNCF
STGLSRRVLVTSVVTGHRQSFGTSSDVLAQQFAVMAPLLFNGCRSGEIFAIDLRCRNQGK
GWKATRLLHDSAVTSVQILQEEQCLMASDMAGTIKLWDLRTTKCIRQYEGHVNEYAHLPL
HVHEEEGIVVAVGQDCYTRIWSLHDAQLLRTIPSPHPTSKADIPSVAFSSRLGGFRGAPG
LLMAIQQDLYCFSYS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaagcagggggcagagtagaagacatgggagaaggagccaccgacacaaccct
tggttcagacagcatggttctaaggagaggaataatacaagggtgcagcaaagcccacag
ggttccagccacagcgatgatgaggccccgtcgacctcctcaagcacagctggcagctct
tctgtgccagatctaccaggttattactttgaccctgaaaagaaacgctacttccgcttg
ctccctggacataacaactgcaaccccctcacgaaggagagcatccggcagaaggaaatg
gagagcaaaaggctgcagctgctagaggaagaggacaagcagggaaagaaaacagccagg
ttgggatttaatgcatcttccttactacaaaaaagcaagctgggttttctcaacgtcacc
agttactgccgtttagcccatgagctgcgagtgagctgcatgcagaggaaaaaggtccag
gttcagagctcggatccctccgctttggcaagtgaccgatttaacctgatactggcggat
accaacagtgaccggctcttcaccgtgaacgatgtcaaagtcgggggctccaagtatggc
atcatcaacctgcgtggcctgaagacccccacgctcagggtgcacatgcatgaaaacctc
tacttcaccaaccggaaggtgaacgctgtgagctgggcctcgctgaatcacctggattcc
cacattctgctgtgcctcatgggaattgcagagactccaggctgtgccaccctgctccca
gcgtcattgtttgtcagtagtcatccagcaggagaccggcctggcatgctctgcagtttc
cggatccccggggcctggtcctgtgcgtggtccctgaacatccaggcaaataactgcttt
agtacaggcttgtctcggcgagtcctggtgaccagcgtggtgacgggacaccggcagtca
tttgggaccagcagtgacgtcttggcccagcagtttgctgttatggctcctttgctgttt
aatggctgtcgttccggcgaaatctttgccattgatctccgttgtcgaaatcagggcaag
ggctggaaagccacccgcctgttacatgactcagcagttacctctgtgcaaatcctgcaa
gaggagcaatgcctgatggcatccgacatggctggaacgatcaagctgtgggacctgagg
accactaagtgtattaggcagtacgaagggcacgtcaacgagtatgcccacctgcccctg
cacgtgcatgaggaagaaggaatcgtggtggcagtgggccaggactgctacacgagaatc
tggagcctccatgatgcccagctgctcagaaccataccctccccacaccccacttccaag
gccgacattcccagtgtggccttctcttctcggcttgggggcttccggggagcgccaggg
ctgctcatggccatccaacaggacctttactgcttctcgtacagctaa
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