Phocoena sinus (vaquita): 116749197
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Entry
116749197 CDS
T07759
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116749197 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116749197 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
116749197 (PSMC6)
05012 Parkinson disease
116749197 (PSMC6)
05014 Amyotrophic lateral sclerosis
116749197 (PSMC6)
05016 Huntington disease
116749197 (PSMC6)
05017 Spinocerebellar ataxia
116749197 (PSMC6)
05020 Prion disease
116749197 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
116749197 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116749197 (PSMC6)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116749197 (PSMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
TPR_MLP1_2
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
DUF5906
AAA_lid_PRS2_C
TsaE
AAA_24
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
116749197
NCBI-ProteinID:
XP_032479196
Ensembl:
ENSPSNG00000017834
LinkDB
All DBs
Position
2:130150964..130169435
Genome browser
AA seq
403 aa
AA seq
DB search
MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccggcatcccctatgagcggcggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctggagcacaaggagatcgacggccgtctc
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacaaagtgttgggcagattgttggtgaagtacttaagcaattaactgaa
gaaaaattcattgttaaagctacaaatgggccaagatatgttgtgggttgtcgtcgacag
cttgacaaaagtaagctgaagccaggaacaagagttgctttggatatgactacactaact
atcatgaggtatttgccaagagaggtggacccactggtttacaacatgtcgcatgaggac
cccgggaatgtttcttattctgagatcggaggtttgtcagaacagattcgggagttacga
gaggtaatagaattacctcttacaaacccagaattattccaacgtgtaggaataatacct
ccaaaaggctgtttgttatatggaccaccaggtacaggaaaaacactcttggcacgagct
gttgctagccagttggattgcaatttcttaaaggttgtatctagttctattgtagacaag
tacattggtgaaagtgctcgtttgatccgagaaatgtttaattatgccagggaccatcag
ccatgcatcatttttatggatgaaatagatgctattggtggtcgtcggttttctgagggt
acttcagctgatagagagattcagagaactttaatggagctactgaatcaaatggatgga
tttgatactctacatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgcttcgtccaggcagattagatagaaaaatacatattgatttaccaaacgaa
caagcaaggttagatatattgaaaatccatgcaggtcccattacaaagcatggtgaaata
gattatgaagcaattgtgaagctttcagacggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagac
ttcatgaaagcagtcagaaaagtggctgattctaagaagctagagtctaaattggactac
aaacctgtgtaa
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integrated database retrieval system
