Phocoena sinus (vaquita): 116749289
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Entry
116749289 CDS
T07759
Symbol
TRIP4
Name
(RefSeq) activating signal cointegrator 1 isoform X1
KO
K23398
activating signal cointegrator 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116749289 (TRIP4)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
116749289 (TRIP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRI4_N
TRIP4_3rd
ASCH
zf-C2HC5
Amdo_NSP_1-3
Inositol_P
Motif
Other DBs
NCBI-GeneID:
116749289
NCBI-ProteinID:
XP_032479414
Ensembl:
ENSPSNG00000003783
LinkDB
All DBs
Position
2:complement(70774315..70843221)
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AA seq
583 aa
AA seq
DB search
MAVTGALSQEQLVGWCTQQLRKTFGLDVSEEIIQYVLSIESAEELREYVTDLLQGNEGRK
GQFIEELVTKWQKNDQELISDALQQSFKKDEILDGQRSGDQLKRSRRKGRNRQEVPAFTE
PDTTIEVKTPFDLAKAQENSSSLKKKTKFVSLYTKEGQDKLAVLIPGRHTCDCLGQKHKL
INNCLICGRIVCEQEGSGPCLFCGTLVCTREEQDILQRDSNKSQKLLKKLMSVSGTENSG
KVDISTKDLLHHQELRFKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDYFASDSNQWL
SKIEREALQKREEELREFRHASRLSKKITIDFAGRKIMEDENPLTEYHSKLDEAIHAIAN
GTLNQPPNKLDRSSEEPLGLLVNPNLYQSPPQWIDQTGAASQKKAFHSAGSGLEFSSCRH
QFRIQDQEFQEGFDGGWCLSMHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATAKRPSP
QEVSELQTTYLLLRGKDVEFPNDYPSGCLLGCVDLTDCLSQKQFKNQYPDMSQESDSPFV
FICTNPQEMIVKFPIKGSPKIWKLDSKIHQGAKKGLMKQNKAV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgactggggcgttgtcccaggagcagctggtgggctggtgcacccagcagttg
cggaagactttcggcctggatgtcagtgaggagatcatacagtatgttttgtcaattgag
agtgctgaagagttacgagaatatgttactgaccttcttcagggaaatgagggcagaaaa
ggtcaattcatagaagagcttgtaactaaatggcaaaagaatgatcaggagctgatttct
gatgctctgcagcagtccttcaaaaaagatgaaattttagatgggcagaggtcaggagac
cagctaaagaggagcaggcggaaagggagaaacagacaggaagttcctgcatttactgaa
cctgatacaaccatagaggtcaaaacaccttttgatttggccaaggcacaagagaacagc
agctccttaaagaagaagacgaagtttgtcagtttatatacaaaagagggacaggacaag
cttgcagtcctgatccctggtcgccacacttgtgattgcctgggccagaagcacaagctg
atcaataactgtctgatctgtgggcgtattgtctgtgaacaagagggttccggcccctgc
ttattctgtggtactctggtatgtactcgtgaagaacaggatattttacagcgtgactca
aacaagagccagaaactgctgaagaagctcatgtcagtttcagggacagagaattctgga
aaagtggacatctctaccaaggaccttcttcatcatcaagaattgcgatttaaatctggt
ctggagaaagctatcaagcataaagacaaactgttagagtttgacagaactagcattcga
aggacccaagtcattgatgatgagtcagattactttgccagtgattctaaccagtggttg
tccaaaattgaacgggaagccctacagaagcgagaggaggagctgagagaatttcgacat
gcctctcggctctcgaagaagatcaccattgactttgcaggcaggaagatcatggaagat
gaaaatcctctaactgagtatcacagcaaactagatgaggcaatacatgccattgccaat
ggaaccttgaaccaaccaccgaacaaattggatagatcttctgaagagcctttaggactt
ctggtgaatcccaacctgtaccagtcgcctccccagtggatagatcagacgggtgcagcc
tcacagaagaaggctttccattcagcaggatcaggactagagttcagttcatgtcggcat
cagtttcgaatccaggaccaagaatttcaggaaggctttgatggtggctggtgcctctct
atgcatcagccttgggcttctctgcttgtcagagggattaaaagggtggagggcagaagc
tggtacaccccacatagaggacgactttggatagcagccacagccaaaagaccctctcct
caagaagtttcagaactccagactacatatcttctccttcgtgggaaagatgtggaattt
cccaatgactatccatcaggttgtcttctgggctgtgtggacctaactgactgcttgtcc
cagaagcaatttaagaatcagtatccagacatgagtcaagaatctgattctccatttgtt
ttcatctgcacaaatccccaggaaatgattgtgaagtttcctattaaaggaagtccaaaa
atctggaaactggattccaagatccatcaaggagcaaagaaggggttaatgaagcagaat
aaagctgtctga
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