Phocoena sinus (vaquita): 116749333
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Entry
116749333 CDS
T07759
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116749333 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116749333 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116749333 (SRSF5)
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
SR proteins
116749333 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
116749333
NCBI-ProteinID:
XP_032479495
Ensembl:
ENSPSNG00000008804
UniProt:
A0A8C9BMC3
LinkDB
All DBs
Position
2:145825207..145830531
Genome browser
AA seq
274 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS
WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGS
KRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSKSRSVSRSPVPEKSQKR
GSSSRSKSPASVDRQRSRSRSRSRSRSRSVDSGN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgcgtattcatcgggaggctaaatccagcggcccgggagaaagacgtg
gaaagattcttcaaggggtatggacgaatacgagatattgatttgaaaagaggctttggt
tttgtggaatttgaggatcccagggatgcagatgatgccgtatatgaacttgatggaaaa
gaactctgcagtgaaagggttacaattgaacatgctagggctcgatctcgaggcggaaga
ggtagaggacgctactcagaccgttttagtagtcgcagacctcgaaatgatagacgaaat
gctccacctgtaagaacagaaaatcggcttatagttgagaatttatcttcaagagtcagc
tggcaggatctcaaagatttcatgagacaagctggggaagtaacctttgcggatgcacat
cgacctaaattaaatgaaggggtagttgagtttgcctcttatggtgacttaaagaatgct
attgaaaaactttctggaaaagaaataaatgggagaaaaatcaaattaatcgaaggcagc
aaaaggcacagtaggtcgcgaagcaggtctcgttcccggaccaggagttcctccaggtct
cgtagccgatctcgttcccggagtcgcaagtcttacagccggtccaggagccggagccgg
agccggagcaagtcccgttctgttagtaggtctcctgtgcctgagaagagccagaaacgt
ggttcttcaagtagatctaagtctccagcatctgtggatcgccagaggtccaggtccagg
tcccggtcccggtcaaggtccagatcagttgacagtggcaattaa
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