Phocoena sinus (vaquita): 116749342
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Entry
116749342 CDS
T07759
Symbol
SCAPER
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116749342 (SCAPER)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116749342 (SCAPER)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
116749342
NCBI-ProteinID:
XP_032479521
Ensembl:
ENSPSNG00000001222
UniProt:
A0A8C9B6G6
LinkDB
All DBs
Position
2:complement(59268169..59791731)
Genome browser
AA seq
1407 aa
AA seq
DB search
MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTH
KMTKQNTTVDCKITSSTTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVT
CESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGR
HVIPSPSTDRISVTSNARRSLNFGGSPGTVAAPRLAPTGVSWADKVKAHHTGSTASSDVA
PAQSCPPMTVQKPSRKNERKDAEGWETVQRGRPVRSRSTAVMPKVSLPTEALRSKDDSDK
ENVRLLPDQSIQKGEFVGGGPSNTIESRLKDSLHSCDHPLAERTQFTVSTLDDVKNSGSS
FLQDNSVQTSEIPAVHIDIECVSVTQQADTPLQASEDKFSEEKERIESEMDPSDISNVSA
ANLSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFS
ASMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSS
PSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRM
MEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLN
ELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAR
EDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSS
GRHANTDYAPKLTPYERKKQCSLCNVPISSEVYLFSHIKGKKHQQAVRENSSIQGRELSD
EEVEHLSLKKYIIDIVVESAAPPEPLKDGEERQKNKKKAKKIKARMNFRAKEYESLLETK
NSGSDSPYKAKLQRLAKDLLKQLQVQDSGSWANNKVSALDRTLGEVTRILEKENVADQIA
FQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNK
ITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIANRPDGNS
QPITPKISTQEMKSKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKTA
TFLQHAAGLLHGMCTLCFAVTGRSHSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFH
GTISDPGTSSPKESYAQNTVQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASS
LLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRL
IKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQDFAQTPGQADTQSYQPKGKCLGSQ
DYLELANRFPQQAWEEARQFFLKKEKK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcattccagcgctccaatagtcatgacaaagtaaggagaatagttgcagag
gagggtcgtacagcaagaaacctaatagcttggagtgttccactagaaagcaaagatgat
gatggaaaatctaaatgtcaaactggtggaaaatcaaagaggacaattcagggcactcat
aaaatgacaaaacagaacactacagtagactgtaaaataacgtcatctacaactggagat
aaacactttgataaaagtcccactaaaacaaggcaccctcggaagattgatctaagagct
cgatactgggcattcctttttgacaatcttcgccgggctgtagatgaaatctatgtaact
tgtgaatcagatcagagtgtggtggaatgtaaggaggtgctaatgatgctggataattat
gtaagagatttcaaagcgttgattgactggattcaacttcaggaaaagctagagaagaca
gatgctcaaagcagaccaacttcattggcatgggaagtaaagaagatgtccccaggacgt
catgtgattccaagtccgtcaacagatagaataagtgtaacgtcaaatgctcgaagaagc
ttaaattttgggggttcacctggcacagtggctgctccgcgtctggctcccacaggtgtc
agttgggctgacaaggtaaaggctcatcatacaggctctactgcttcttcggatgtagca
cctgcccagtcttgcccaccaatgacagtgcagaagccttcccgcaaaaatgaacggaaa
gatgctgaaggatgggaaactgttcagagaggaaggcctgttcgttcacgatcaacagca
gtgatgccaaaagtttcattaccaacagaagcattaagatcaaaggatgacagtgataaa
gaaaatgtacgtcttctacctgaccaaagtattcagaaaggtgaatttgttggaggtgga
ccttctaatactatagaatctcggctcaaagactcattacactcatgtgatcatcctctc
gcagagagaacccagttcacagtgagtacactggatgatgtcaagaactctggcagtagt
ttcttacaagacaattctgtgcaaacttctgaaatacctgccgttcacattgatatagag
tgtgtttcagttactcagcaagctgacacacctttgcaagcaagtgaagacaaattttca
gaagagaaagaaagaatagaaagtgaaatggatccttcagatatttcaaatgtgagtgct
gctaacttgtctatggcagaagttcttgctaaaaaggaagagctagcagatcgtctagaa
aaggccaatgaagaagccattgctagtgctattgctgaagaggaacagttaactagagaa
attgaagctgaagaaaacaatgatatcaatattgaaactgacaacgacagtgatttttct
gccagcatgggcagtggaagtgtatctttctgtggtatgtctatggattggaacgatgta
cttgcagattatgaagctcgtgagtcttggcgccagaatacatcctggggggatattgta
gaggaggaacctgctagacctccaggacatggaattcacatgcatgaaaaactttcctca
ccatctcgtaaaagaacaattgcagaatctaagaagaaacatgaagaaaaacaaatgaaa
gcacagcagctaagggaaaagttacgtgaagagaaaacattaaagcttcagaaattgtta
gaaagggagaaagatgtccggaagtggaaagaagagttactagaccaacgacgtaggatg
atggaagagaaattacttcatgctgaatttaaacgagaggtgcagttacaagcaattgtt
aaaaaagcacaagaggaagaagctaaggtaaacgaaattgcctttataaataccctcgaa
gcccagaacaaacgccatgatgttttatcaaaattgaaggaatatgagcagaggcttaat
gagttacaggaagagcgtcagcgaagacaggaagaaaagcaagcacgtgatgaagctgtt
caggaacgtaagagagctctagaagcagaacggcaggcccgtgtagaagaattgttaatg
aagaggaaagaacaagaagcccgaattgagcaacagaggcaagaaaaggaaaaagcccgg
gaagatgctgcccgggaaagagctagagacagggaagaacgattggcagcactcacagct
gctcaacaagaagctatggaagagctacagaaaaaaattcagctcaagcatgatgaaagc
attagaaggcacatggaacagattgagcaaagaaaagaaaaagctgctgagttaagcagt
ggacgacatgcaaatactgattatgcccccaaattgaccccttatgaaagaaagaagcag
tgttctctctgcaatgtcccgatctcttcagaggtgtatctttttagccacattaaagga
aaaaaacaccagcaagctgtgagagaaaatagcagcatccaagggcgtgaactttcagat
gaggaagtggagcacctttccttaaagaagtatattattgacattgtggttgaaagtgca
gctccaccagagcctttgaaagatggagaagagcggcaaaaaaacaaaaaaaaagccaaa
aagataaaagcccggatgaacttcagggccaaggaatacgagagtttattggaaacaaaa
aattctggctcagactcaccctataaagcaaagcttcagcgattagccaaagatcttcta
aaacaactacaagtacaagacagtggctcatgggcaaacaataaggtttctgctttagat
cgtacccttggtgaggtcactagaatattggaaaaagagaatgtggcagatcagattgca
tttcaagttgctggtggattaacagcccttgaacacattcttcaagtagtggtcccagtc
acaaatgtgaacacagtttcacgaattcctcctaagtctctctgcaatgcaatcaatgtt
tacaacctcacctgcaataactgttcagaaaactgcactgatgttctgtttagtaacaag
attaccttcttaatggacctcctcatacaccagttgacggtttatgttccagatgaaaat
aatgctattttgggaagaaatacaaataagcaagttttcgaaggcttgacaactggactt
ctcaaagtcagtgctgtggtttttggctgcctgattgccaatcgaccagatggaaacagc
cagccaattacaccaaaaatatcaacacaggaaatgaaaagcaaaccctcacaaggtgat
gcttttaacagtcgagttcaggacctcatcagctacgtggtgaacattggtctgatcgac
aagctttgtggctgcttcctctcggtgcaaggcccagtggatgagaatcccaaaacagcc
acatttctgcagcacgccgcagggctcttacacggaatgtgcacgctgtgctttgctgtc
accggaaggtcacacagcatatttgacaataatcgccaggatcccacgggactgacagct
gctcttcaggccacagacctggctggagttctgcatatgctctactgtgtcctcttccat
ggcacaatctcggaccccggcacttctagtcccaaggagagttacgctcagaacacagtc
caagtggccattcagagtttacgtttcttcaacagctttgcagctcttgacctgcctgct
tttcagtctattgtaggggcagagggcttgtcccttgcattccggcacatagccagctcc
ctactgggccactgcagccacgtctcctgtgaaagcctccttcatgaggtcatcgtctgt
gtgggctacttcactgtcaaccacccagataaccaggtcatcgtgcagtccggccgccac
cccacggtgctgcagaagctttgccagttgcccttccagtatttcagtgacccacggctg
atcaaagtgctgttcccttcacttatcgctgcttgttacaacaatcttcagaacaagatc
attctggagcaggagatgagctgtgttctactggccacgttcattcaggattttgcacag
actccgggtcaggcagatacccagtcttatcagcccaaaggaaaatgccttggttcccaa
gactatcttgagctggctaacagatttcctcagcaggcctgggaagaagctcgacagttt
ttcttaaaaaaagagaaaaaataa
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