KEGG   Phocoena sinus (vaquita): 116749351
Entry
116749351         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: charged multivesicular body protein 4b-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu04144  Endocytosis
psiu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116749351
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116749351
  09143 Cell growth and death
   04217 Necroptosis
    116749351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116749351
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116749351
Membrane trafficking [BR:psiu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    116749351
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116749351
  Exosomal proteins of other body fluids (saliva and urine)
   116749351
  Exosomal proteins of colorectal cancer cells
   116749351
SSDB
Motif
Pfam: Snf7 Syntaxin SYF2 BIV_Env
Other DBs
NCBI-GeneID: 116749351
NCBI-ProteinID: XP_032479540
Ensembl: ENSPSNG00000007888
LinkDB
Position
2:complement(133939022..133939695)
AA seq 224 aa
MSVFAKLFGAGAGKAGKGGPTPQRAIQRLRDTEVMLSKKQEFLEKKIEQELTAAKKHGTR
NXRAARQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMDYASKAMKASH
DNMDMDKVDELMQDFADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNL
LEISGPETVPLPNVPSISLPSKPTKKKEEEDDDMKELETWAGSI
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtctgtgttcgcgaagctgttcggggctggagcgggtaaagccggcaagggcggcccg
accccccagagggccatccagaggcttcgggacacggaggtgatgctaagtaagaagcag
gaattcctggagaagaagatcgagcaggagctgacagccgccaagaagcacggcaccaga
aacnagcgcgctgcccgccaggcactgaagcgcaagaagaggtatgaaaagcagctggca
cagatcgatggcacactgtcaaccatcgaattccagcgagaggccctggagaatgctaac
accaacaccgaggttctcaagaacatggactatgcctccaaagccatgaaggcttcccac
gacaacatggacatggataaagttgatgagttaatgcaggactttgctgaccagcaggaa
cttgcagaagagatttcaacagctatttcaaaacctgtagggtttggagaagagtttgac
gaggatgagctcatggcagaattagaagaactagaacaggaggaactagacaagaatttg
ctggaaatcagtggaccagaaacagtccctctaccaaatgttccctctatatccctacca
tcaaaacccaccaagaagaaggaagaggaagacgatgacatgaaggaactggagacctgg
gctggatccatttaa

DBGET integrated database retrieval system