Phocoena sinus (vaquita): 116749382
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Entry
116749382 CDS
T07759
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116749382 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116749382 (CAPN3)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
116749382 (CAPN3)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C2: calpain family
116749382 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
116749382
NCBI-ProteinID:
XP_032479586
Ensembl:
ENSPSNG00000000741
LinkDB
All DBs
Position
2:complement(91893188..91942059)
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AA seq
729 aa
AA seq
DB search
MLTVISTSVAPRTGAEPRSPGPIPQAAQGKGTEAGGGNPSGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYVDPEFPPDETSLFYSQKFPIQFIWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNKRLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNELVFTKSNHHNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMKKAIERGSLMGCSIDTIVPVQYETRMACGLVKGHAYSVTGLEEALYKG
EKVKLVRLRNPWGQVEWNGSWSDSWKNWSFVDKNEKARLQHQVTEDGEFWMSYDDFIYHF
TKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEED
DDPDESEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYN
ASKARSKTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTI
SVDRPVSEPGSADQESEEQQQFGNIFRQIAGDDMEICADELKNILNRVVNKHKDLKTQGF
TLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGTINSYEMRNAVN
DAGFHLNNQLYDIITMRYADRSMNIDLDSFICCLLRLEGMFRAFNAFDKDGDGIIKLNVL
EWLQLTMYA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtcattagcacgtctgtggccccacggacaggggctgagcccaggtctccg
gggccaatcccccaggcagcccagggcaagggcaccgaggccggcggcggaaacccaagt
ggcatctactcagccatcatcagccgcaattttcccattatcggggtgaaagagaagaca
tttgagcagcttcacaagaaatgtctagaaaagaaggttctttatgtggatcctgagttc
ccaccggatgagacctctctcttttatagccagaagttccccatccagttcatctggaag
agacctccggaaatttgtgagaatccccgatttatcattggcggagccaacagaactgac
atctgtcaaggagatctaggggactgctggtttctcgcagccatcgcttgcctgaccctg
aacaagcgactgcttttccgggtcataccccatgatcagagtttcaccgaaaactacgcg
gggatctttcacttccagttctggcgctatggagactgggtggacgtggttattgatgac
tgcctgccgacttacaacaatgaactggttttcaccaaatccaaccaccacaatgagttc
tggagcgctctgctggagaaggcttatgctaagctccatggttcatatgaagccctgaaa
ggtgggaacactacagaggccatggaggacttcacaggaggagtaacagagttttttgaa
atcaaggatgctcccagagacatgtacaagatcatgaagaaagccatcgagaggggctcc
ctcatgggttgctccattgatacgattgttccagttcagtacgagacaagaatggcctgc
gggctggtcaaaggccacgcctactcagtcactgggctggaggaggccctgtacaagggt
gagaaagtgaagctggtgcggctgcggaacccctggggccaggtggagtggaatggctcc
tggagtgacagttggaagaactggagctttgtggacaagaacgagaaggcccgtctgcaa
caccaggtcacggaggatggagagttctggatgtcctatgacgatttcatctaccatttc
acaaagctggagatctgcaacctcacagctgatgccctggagtccgacaagcttcagact
tggacagtgtccgtgaacgagggccgctgggtgaggggctgctctgctggaggctgccgc
aacttcccagacactttctggaccaaccctcagtaccgtctgaagctcctggaggaggat
gacgaccctgacgagtccgaggtgatctgcagcttcctggtggccctgatgcagaagaac
cggcggaaggaccggaagctgggggccaacctcttcaccatcggcttcgccatctacgag
gttcccaaagagatgcacggaaacaagcagcacctgcagaaggacttcttcctgtacaac
gcctccaaggccaggagcaaaacctacatcaacatgcgggaggtgtctgagcgcttccgc
ctgcctcccagcgagtatgtcattgtgccctccacctacgagccccaccaggagggggaa
ttcatcctccgggtcttctctgaaaagaggaacctctctgaggaagttgagaatacaatc
tccgtggatcggccagtgtcagagcccggcagtgctgaccaggaaagtgaggaacagcag
caattcgggaacattttcaggcagatagcaggcgatgacatggagatctgtgcggatgag
ctcaagaatatccttaacagagttgtgaacaaacataaggatctgaagacacaaggcttc
acgctggagtcctgccgtagcatgattgctctcatggacacagacggctctgggagactg
aacctgcaagagttccatcacctctggaagaagattaaggcctggcagaaaattttcaag
cactatgacacagaccaatccggcaccatcaacagctacgagatgcgaaatgcagtcaat
gacgcaggcttccacctcaacaaccagctctacgacatcatcaccatgcgctatgcagac
aggtccatgaacatcgacctcgacagcttcatctgctgcctcctcaggctggagggcatg
ttcagagcttttaatgcatttgacaaggatggtgacggtatcatcaaactcaacgttcta
gagtggctgcagctcaccatgtacgcctga
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