Phocoena sinus (vaquita): 116749414
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Entry
116749414 CDS
T07759
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116749414 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116749414 (EFL1)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
GTPases
116749414 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
EFG_IV
MMR_HSR1
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
116749414
NCBI-ProteinID:
XP_032479637
Ensembl:
ENSPSNG00000003498
UniProt:
A0A8C9B4I6
LinkDB
All DBs
Position
2:complement(34860348..34994128)
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AA seq
1128 aa
AA seq
DB search
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQVRGITMKSSAISLHYAKGEEEYLINLIDSPGHVDFSSEVSTAIRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERETESQVNPDSEQGEQVYDWSTGLEDTDDSHLYFSPDQGNVVFTSAIDG
WGFGIEHFAEIYSQKTGIKKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISEAVLAMVC
QKLPSPLDITAERVEKLMCAASQTFDSLPPETQALKAAFMKCGSEDTAPVIIFVSKMFAV
DAKALPQNKQRPLTQEEIAERHERARRRHAEKLAAAQGQAPLEPTQDGSALETSPQGEEL
KGDEQEVESETRKPVAQEGNDREPFIAFARVFSGVARRGKKIFVLGPKYSPLEFLQRVPL
GFSAPLDDLPPVPHMACCTLENLYLLMGRELEDLEKVPPGNVLGIGGLQDFVLKSATLST
LPSCTPFIPLNFEATPIVRVAVEPKHPSEMPQLVRGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIQISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
TKEDQNRIPEGIQVYSGGLITMTTPNKLATLSVRAMPLPEEVTQILEENSDVIRSMEQLI
SSLNEGKNTQMIHQKTQEKIWEFKGKLEQHLTGRKWRNTVDQIWSFGPRKCGPNILVNKS
KDFQNSVWTGPDGKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLS
KFEDQTASDKQNQEQSDLVKEGQGEGETCSGRDEHQDLQGGCSEPFEKRASQKGESSLTD
CYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQ
EEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLIFSHWEIIPSDPFWVPTTEE
EYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaacagtttggataagatgattcaactccagaaaaacacggctaacatcagg
aatatctgtgttttggctcatgttgaccatggaaaaactactctggctgactgtcttata
tctagcaatggcattatctccagccgcctggcaggcaagttaaggtacatggacagcaga
gaggatgaacaggtccgagggatcactatgaaatccagtgccatttcactacattatgca
aaaggtgaggaggagtacctgattaatctgatagactctccaggacatgtggatttctcc
tcagaagtatcgacggctattcgcatttgtgacgggtgcatcattgtagtggatgctgtg
gaaggggtctgtccacagacacaggcagttctgcgacaagcctggctcgaaaacatccgt
ccagttttagtgattaataagatagatcgcttgatagtggaactgaaattcaccccacag
gaggcctattctcacctcaagaatattttagaacagattaatgcactcacaggaactctt
tttacttctaaagtgctagaagaaagagcagagagagagactgaatcccaagtgaatcca
gattctgagcaaggagagcaagtgtatgactggagcactggcttggaggacacggatgat
tctcacctttacttctctccagaccagggaaatgtggtatttacaagtgcaatagatggg
tggggctttggaattgagcactttgccgaaatctacagtcaaaaaactggcatcaaaaag
gaagttcttttgaaaaccttgtggggagattattatataaatatgaaggctaagaagatt
atgaaggttgatcaggcaaaaggaaagaaacctttatttgtacagttgatcctggaaaat
atatggagtttgtatgatgctgtcttgaaaaaggacaaagaaaaaattgataaaatcgtg
acttctttaggattaaaaattggagcccgagaggcacggcattcagaccctaaagttcag
atcaatgctatttgcagtcagtggcttcccatatctgaggctgttcttgctatggtgtgt
cagaaacttcctagtccccttgatattacagccgagagagtggagaaactgatgtgcgca
gcatcgcaaacatttgattctcttccaccggaaacccaggcactgaaagcagcttttatg
aaatgtggaagcgaagacactgctccggttattatctttgtttccaaaatgtttgcagtt
gatgctaaggctttgcctcagaataagcaaagacctctcactcaggaggagattgctgag
aggcatgagcgtgcaagacgaaggcacgcggagaagctggcagccgcgcagggccaagca
cccttggagcccacccaggacgggagtgcccttgaaacgagtccacagggagaagagctg
aaaggtgatgagcaagaggtggagagtgagacccgtaaacctgtggcccaggaaggaaat
gaccgagagccttttattgcatttgctcgagtattcagtggcgtggctcgaagaggaaag
aaaattttcgtcttggggcccaaatacagtcctcttgagtttttgcagcgggtgccatta
ggcttctcagctccattagatgaccttccccccgtcccccacatggcatgctgtaccctg
gaaaacctgtatcttctgatgggaagggaactggaagatctagagaaggtacctccagga
aatgtgctaggaataggaggccttcaagactttgtgctgaaatcggcaacactgtctacc
ttgccctcctgcacgccatttataccactcaactttgaagccacccctattgtgagggtt
gctgttgaaccgaaacatccaagtgaaatgcctcagctcgtcagaggaatgaaactgtta
aaccaagctgatccctgtgtccagattttaattcaggaaacgggagagcacgttttagtc
acagcaggggaagttcaccttcagcgatgcctggatgacttaaaagaaaggtttgcaaag
attcaaatcagtgtatctgaacccattattccattcagagaaacaatcacaaaacccccc
aaagttgacatggtcaatgaagaaataggcaaacaacaaaaagttgcagtcatacaccaa
acaaaagaagatcaaaacagaatccctgaaggaatccaagtttactctggtgggctaatc
accatgacaacccccaataaacttgccacactcagtgttcgagccatgccccttccagaa
gaagtcactcagattctggaagaaaatagtgatgtgattcgttctatggagcagttgata
tcctctttgaatgagggtaaaaacactcagatgattcaccagaagacccaagagaaaatt
tgggaattcaaaggaaaactagagcaacatctaacagggagaaaatggaggaacactgtt
gaccaaatctggtcgtttggcccaagaaaatgtgggcccaacatattagtaaataaaagt
aaagattttcagaattcagtatggacaggcccagatggcaaagcatcaaaagaagccagt
agataccgagatttgggcaatagcatcgtgagtggcttccagctagcaaccctctctggc
cccatgtgtgaggagcctctcatgggtgtctgttttgttctggaaaaatgggacctaagt
aaatttgaagaccaaacagcaagtgataagcagaatcaagaacaaagtgatctggtaaaa
gagggacagggggaaggtgaaacctgttctggtagagatgaacaccaagacctacaaggt
ggctgctccgagccctttgagaagagggcttcccagaaaggagagtcttcactcaccgac
tgctatggacccttctcaggacagctcattgccaccatgaaggaagcctgtcgctatgca
ctgcaagtgaaacctcagcgtctgatggcagcaatgtacacgtgtgacatcatggccacc
agtgatgttctcggtcgggtctatgcggtcttgtcaaagagagaaggtcgagtgctacaa
gaggaaatgaaagaggggacggacatgttcatcatcaaggctgtgctgcccgtggccgaa
agctttggctttgctgatgaaattaggaagaggacaagtggcctggccagcccgcagctg
atatttagccattgggagatcattcccagcgaccccttctgggtaccaaccactgaggag
gagtatttgcactttggggaaaaggctgattctgagaaccaggcccggaagtacatgaat
gcggtacgaaagcggaagggtctttatgtggaagagaagattgtggagcacgcagaaaag
cagagaaccctcagcaaaaataagtaa
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