Phocoena sinus (vaquita): 116749457
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Entry
116749457 CDS
T07759
Symbol
ADAMTS17
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 17
KO
K08631
a disintegrin and metalloproteinase with thrombospondin motifs 17 [EC:3.4.24.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116749457 (ADAMTS17)
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
116749457 (ADAMTS17)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
TSP_1
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP1_spondin
Reprolysin_5
Reprolysin_3
Adt-1
Pep_M12B_propep
ADAMTS_CR_3
Reprolysin_4
Reprolysin_2
TSP1_CCN
Peptidase_M10
PLAC
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
116749457
NCBI-ProteinID:
XP_032479727
Ensembl:
ENSPSNG00000007060
LinkDB
All DBs
Position
2:complement(51111942..51463181)
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AA seq
1120 aa
AA seq
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MCDGALLPPLVLPLLLLLVWGLDPGTAVGDAAADVEVVLPRRVLPEDVHLPPLPGTPGPR
RRRRPRAPPAVPRARPGERALLLHLPAFGRDLYLQLRRDLRFLSGGFEVEETGAAGRRGR
PTELCFYSGSVLGYPGSFVSLSACGGAGGLVGLIQLGQEQVLIQPLNNSQGQEHLIRRRW
SLTPSPSAETQISGQLCKVLTEKKKPRRGWPSRDWRERRNAIRLTTEHTVETLVVADADM
VQYHGAEAAQRFILTVMNMVFNMFQHQSLGIKVNIQVTKLVLLRQRPAKLSIGHHGERSL
ESFCHWQNEEYGGARYLGNNQVPGGKDDTPPVDAAVFVTRTDFCVHKDEPCDTVGIAYLG
GVCSAKRKCVLAEDNGLNLAFTIAHELGHNLGMNHDDDHSSCAGRSHIMSGEWVKGRNPS
DLSWSSCSRDDLENFLKSKVSTCLLVTDPRSQHAVRLPHKLPGMHYSANEQCQILFGTNA
TFCRNMEHLMCAGLWCLVEGDTSCKTKLDPPLDGTECGADKWCRAGECVNKTPIPEHVDG
DWSLWGSWSMCSRTCGTGAHFRQRKCDNPPPGPGGTHCLGASVEHAVCENLPCPKGLPSF
RDQQCQMHDRLSSKKKGLLTAVVVDDKPCELYCSPLGKESPLLVADRVLDGTPCGPYETD
LCVHGRCQKIGCDGIIGSAAKEDRCGVCSGDGKTCRVVKGDFSHSRGTGYIEAAIIPAGA
RRIRVVEDKPAHSFLALKDSSKRSINSDWKIELPGEFQIAGTTVRYVRRGLWEKISAKGP
TKMPLHLMVLLFHDQNYGIHYEYTIPVNYTAENQSEPEKPQDSLFIWTHSSWEGCSVQCG
GGERRTIVSCTRIVNKTTTLVNDSDCPQASRPEPQIRRCNLHPCQSRWVAGPWSPCSATC
EKGIQHREVTCMYQLQNGTHVATRPLYCPVPRPSAVQSCEGQDCLSIWEASEWSQCSASC
GKGTKKRTVTCTNSQGKCDASTRPRAEEPCEDYSGCYEWRTGGWSKCSSTCGKGLQSRVV
QCMHKVTGRHGNECPTLSKPAAYKQCHQEVCNDKINVNTITSPRLAALTYKCTRDQWTVY
CRVIREKNLCQDMRWYQRCCQTCRDFYANKMRQPLLPPSS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacggcgccctgctgcctcctctcgtcctgcccttgctgctgctgctggtttgg
ggactggacccgggcacagctgtcggcgacgcggcggccgacgtggaggtggtgctcccg
cggcgggtgctccccgaagacgtgcacctgccgccgctgcccggcactccagggccccgc
aggcgccggcgcccccgcgcgcccccagccgtcccgcgcgcccggcccggcgagcgcgcc
ctgctgctgcacctgccggcctttgggcgcgacctgtacttgcagctgcgccgtgacctg
cgcttcctgtctggcggcttcgaggtggaggagaccggcgcagccgggcgccgcggacgc
cccacagaactgtgcttctactctggcagcgtgctcggctaccccggctccttcgtctcg
cttagcgcctgcggcggcgccggcggcctggttggcctcatccagcttgggcaggagcag
gtgctaatccagcccctcaacaattcccagggacaagagcatctgatcaggcgcagatgg
tccttgacacccagcccctctgccgagacccagatatctgggcagctctgcaaggtccta
acagaaaagaagaagccgaggaggggctggccgtcacgagactggcgggagcggaggaat
gccatccggctgaccaccgagcacacagtggagacgctggtggtggccgatgctgacatg
gtgcagtaccatggggccgaggccgcccagaggttcatcctcactgttatgaacatggta
ttcaatatgtttcagcaccagagccttggaattaaagttaacattcaagttaccaagctt
gtcctgctacgacagcgtcctgccaaattgtccattgggcatcatggtgagcggtcactg
gagagcttctgtcactggcagaatgaggagtatggaggcgcacggtacctcggcaacaat
caggttccaggaggcaaggacgatacgccccccgtggatgccgctgtattcgtgaccagg
acagatttctgcgtacacaaagatgaaccttgtgacaccgttggaattgcttacttagga
ggtgtgtgcagtgctaagaggaaatgtgtgcttgccgaagacaatggcctcaatttggcc
tttaccatcgctcatgagctgggccacaacttgggaatgaaccacgatgacgaccactcc
tcctgtgctggcaggtcccacatcatgtcgggagagtgggtgaaaggccggaaccccagc
gacctctcctggtcctcctgcagtcgagatgaccttgaaaacttcctcaagtcaaaagtt
agcacttgtttgctggtcacagaccccaggagccagcacgcagtgcgcctgccccacaag
ctgccaggcatgcactacagcgccaacgagcagtgccagatcctcttcggcaccaatgcc
accttctgcagaaacatggagcatctgatgtgcgctggactgtggtgcctggtggaagga
gatacatcctgcaaaaccaaactggaccctcccctggatggcacagagtgtggggcagac
aagtggtgccgcgcgggggagtgtgtgaacaagacgcccatcccggagcacgtggatgga
gactggagcctgtggggcagctggagcatgtgcagccgcacgtgtggcacgggagcccac
ttccggcagaggaaatgcgacaaccctcccccggggcctggaggcacgcactgcctgggc
gccagcgtggagcacgcggtctgtgagaacttgccctgccccaagggcctgcccagcttc
cgtgaccagcagtgccagatgcatgaccggctgagcagcaagaagaagggcctgctgaca
gcagtggtggttgacgataagccgtgtgaactctactgctcgcccctcgggaaggagtcc
ccgctgctggtggccgacagggtcctggacggcacgccttgcgggccctacgagaccgac
ctctgtgtgcacggcaggtgccagaaaatcggctgtgatggaatcattgggtctgcggcc
aaagaagaccggtgtggggtctgcagcggggacggcaagacctgccgcgtggtgaagggt
gacttcagccactctcggggcacaggttatattgaagctgctatcattccagctggagct
cgaaggattcgcgtggtggaagataaacctgcccacagttttctggctctcaaagactcc
agcaagagatccatcaacagtgactggaagatagagctccccggagagttccagattgca
ggcacgaccgtccgctatgttagaaggggcctgtgggagaaaatttccgccaagggacca
accaaaatgcctctgcatttgatggtgttgttatttcatgaccaaaactatggaattcat
tacgaatacaccattcccgtaaactacactgctgaaaatcaaagtgaaccagaaaaacca
caggactccttgttcatctggacccacagcagctgggaaggttgcagtgtgcagtgcgga
ggaggggaacgcagaaccatcgtgtcctgcacacggattgttaacaagaccacgactctg
gtgaacgacagtgactgccctcaagccagccgtccggagccccagatccgaaggtgcaac
ttgcacccatgccagtcacggtgggtggcaggcccatggagcccctgctcagcgacctgt
gagaaaggcatccagcaccgggaagtgacctgcatgtaccagctgcagaatggcacacac
gtcgccactcggcccctctactgcccggtgccccggccatcagcagtgcagagctgcgaa
ggccaggactgcctgtccatctgggaggcgtcagagtggtcacagtgttctgccagctgt
ggtaaagggacaaagaaacgaactgtgacatgcaccaactcgcaaggaaaatgcgacgca
tccacgaggccaagagctgaggagccctgtgaggactactccggctgctatgagtggaga
acagggggctggtccaagtgctcatcgacctgtgggaagggcctgcagtcccgtgtggtg
cagtgcatgcacaaggtcactgggcgccatggcaatgagtgccctaccctctccaagcca
gcagcctacaaacagtgccaccaagaagtctgcaatgacaagatcaacgtgaacaccatc
acttcccctcgcctcgctgctttgacctacaaatgcacacgggaccagtggacagtgtat
tgcagggtcatccgagaaaagaacctctgccaggacatgcggtggtaccagcgctgctgc
cagacatgcagggacttctatgcgaacaagatgcgccagccactgctgccaccaagttca
tga
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