Phocoena sinus (vaquita): 116749474
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Entry
116749474 CDS
T07759
Symbol
MAN2C1
Name
(RefSeq) alpha-mannosidase 2C1 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
116749474 (MAN2C1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116749474 (MAN2C1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
116749474 (MAN2C1)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
116749474 (MAN2C1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
116749474
NCBI-ProteinID:
XP_032479746
Ensembl:
ENSPSNG00000001726
LinkDB
All DBs
Position
2:61027103..61038589
Genome browser
AA seq
1086 aa
AA seq
DB search
MAPAGRIHASLAFPPRGETQASATWAEGQSARREKGWGPGGGDGGRLSCEAALPAVHRGN
ASPHPPAGPVARAHLPLPPRLFGDSCPVAELSSFLTPERLPYQEAVQQDFRPAQVGDSFG
PTWWTCWFRVELTIPEAWVGQEVHLRWESDGEGLVWRDGEPVQGLTKEGEKTSYVLTDKL
GEEDPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQVSRAELAVFHRGVHKLLVDLEL
LLGIAKGLGEDNQRSYQALYTANQMVNICDPAQPETFPVAQALASKFFGQRGGESQHTIH
ALGHCHIDTAWLWPFKETVRKCARSWVTVVQLMERNPEFIFACSQAQQLAWVKSHYPGLH
ARLQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQSFFLQEFGKMCSEFWLPDTF
GYSAQLPQIMRSCGIGHFLTQKLSWNLVNSFPHHTFFWEGLDGSRVLTHFPPGDSYGMQG
SVEEVLKTVAKNRDKGRTNHSAFLFGFGDGGGGPTQTMVDRLKRLCNTDGLPRVQFSSPE
RLFSALEGHSGQLCTWVGELFLELHNGTYTTHAQIKKGNRECERILHDVELLSSLALARS
AQFLYPAAQLQDLWRLLLLNQFHDVVTGSCIQLVAEEAMCHYEDIRSRGNTLLSAAAAAL
CAGEPGPEGLLIVNTLPWKRTEVLALPRPGGAHCLALVTVPSMGYAPAPTPTSLQPLLPQ
QPVFVVQETDGSVTLDNGIIRVRLDPTGRLTSLVLVASGREAVAEGAVGNQFVLFDDVPL
YWDAWDVMDYHLETRKPVLGQAGTLAVGTQGGVRGSAWFLLQISPSSRLSQEVVLDVGCP
YVRFHTEVHWHEAHKFLKVEFPARVRSPQATFEVQFGHLQRPTHYNTSWDWARFEVWAHR
WMDLSEHGFGLALLNDCKYGASVRGSVLSLSLLRAPKSPDATVDMGRHEFTYALMPHEGS
FQDAGVIPAAYSLNFPLLALPAPGPAPAAAWSAFSVSSPAVVLETVKQAETSLQGRKLVL
RLYEAHGSHVDCWLHMSLPVQEAVLCDLLERRDPAGPLPLRDSRLKLTFSPFQVQSLLLV
LQPAPS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggccggccgcatccacgcgtctctagccttcccgccccggggggaaacccaa
gcttcggccacctgggccgagggacaaagtgcccgccgcgaaaagggctggggcccagga
ggaggggatggggggagactgagctgtgaggcagccctcccggcggtgcatcgagggaac
gcgagtccccacccgccggctggcccagtggcgcgtgcccacctgcccctcccgcccagg
ctcttcggagacagctgcccagtggccgagctctccagcttcttgacgcccgaaaggctt
ccctaccaggaggcagtccagcaggatttccgccccgcgcaggtcggcgacagcttcgga
cccacatggtggacctgttggttccgggtggagctgaccatcccagaggcatgggtgggt
caggaagttcaccttcgctgggaaagtgatggagaaggcctggtgtggcgtgatggggaa
cctgtccagggtttgaccaaagagggggagaagaccagctatgtcctgactgacaagctg
ggggaagaagacccccggagcctgaccctctatgtggaagtagcctgcaatgggctcctg
ggggccgggaagggaagcatgatcgcagcccctgacccagagaagatgttccaggtgagc
cgggctgagctggccgtgttccaccggggtgtccacaagctcctggtggatctggagctg
ctgctggggatagccaagggcctcggggaggacaaccagcgcagctaccaggccctgtac
acagccaaccagatggtgaacatatgtgaccccgcccagccggagaccttcccagtggcc
caggccctggcctccaagttctttggccaacgtgggggtgaaagccagcataccatccat
gccctggggcactgccacattgatacagcctggctctggcccttcaaggagaccgtgcgg
aaatgtgcccggagctgggtgacagtcgttcagctcatggagcggaatcctgagttcatc
tttgcctgctcccaggcacagcagctcgcgtgggtgaagagccactaccctggcctgcat
gcccggctccaggagttcgcctgccgtgggcaatttgtgcccgtcgggggcacctgggtg
gagatggatgggaaccttcccagtggagaggccatggtgaggcagttcctgcagggacag
agcttcttcctgcaggagtttgggaagatgtgctctgagttctggctgccagacacattc
ggctactcagcgcagctcccacagatcatgcgcagctgtggcatcgggcacttcctcacc
caaaaactgagctggaacttggtgaactccttcccgcaccatacctttttctgggagggg
ctggatggctcccgggtgctgacccacttcccgcctggtgactcatatgggatgcagggc
agtgtggaggaggtgctgaagactgtggccaaaaaccgggacaaggggcgtaccaaccac
agtgccttcctctttggctttggggatgggggtggtggccccacccagaccatggtggac
cgcttgaagcggctgtgcaatacagatgggctgcccagggtgcagttctcttctccggag
cgactcttctcggcgctggagggccactcggggcagctgtgcacgtgggtcggagagctc
ttcctggagctacataatggcacctacaccacccatgcccagatcaagaaggggaaccgg
gagtgtgagcggatcctgcatgacgtggagctgctcagcagcctggccctggcccgcagt
gcccagttcctctacccggccgcccagctgcaggacctctggaggctcctgcttctgaac
cagttccacgatgtggtgactggaagctgcatccagctggtggcagaggaagccatgtgc
cactacgaagacatccgttcccgtggcaacacactgctcagcgctgcagccgcagccctt
tgtgctggggagccaggtcctgagggcctcctcattgtcaacacactgccctggaagcgc
actgaagtgttggccctgcccaggcctggtggggcccactgcctagctctggtgacagtg
cccagcatgggctatgctcctgctcccacccccacctcgctgcagcccctgctgccccag
cagcctgtgtttgtagtgcaggagactgacggttctgtgactctggacaacggcatcatc
cgggtgaggctggacccaactggccgcctgacgtctctggtgctggtggcctccggcagg
gaggccgttgctgagggtgccgtggggaaccagtttgtgctgttcgatgatgtccccctg
tactgggacgcgtgggacgtcatggactaccacctagaaacacggaagccagtgctgggc
caggcagggaccttggccgtgggcactcagggtggcgtgcggggcagcgcctggtttctg
ctgcagatcagccccagtagtcggctcagccaagaggttgtgctggacgtcggctgcccc
tatgtccgcttccacaccgaggtacactggcacgaggcccacaagttcctgaaggtggag
ttccctgcccgtgtgcggagcccccaggccacctttgaggtccagttcggacatctgcag
cggcccacccactacaacacctcttgggactgggcccgatttgaggtgtgggcccaccgc
tggatggatctgtcagagcacggctttgggctggctctgctcaatgactgcaagtatggc
gcgtcagtgcgaggcagcgtcctcagcctctccctcttgcgggcgcccaagtcccctgac
gccacggttgacatggggcgccacgagttcacctacgcgctgatgccgcatgaagggtcc
ttccaggacgctggcgttattcccgctgcctacagcctcaacttccccctgttggcgctg
cccgccccgggcccggcacccgccgccgcctggagcgccttttcagtgtcctcgcccgca
gtcgtgttggagaccgtcaagcaggcggagaccagcctccagggccgcaagctggtcctg
aggctgtacgaggcccacggcagccacgtggactgctggctgcacatgtcgctgccggtt
caggaggccgtcctctgtgacctcctggagcgccgtgaccctgctggccccctgcccctt
cgggacagccgcctgaagctcaccttttctcccttccaagtgcagtccctgttgctcgtg
ctgcagcccgcaccgagctga
DBGET
integrated database retrieval system
