Phocoena sinus (vaquita): 116749482
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Entry
116749482 CDS
T07759
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
psiu04144
Endocytosis
psiu04530
Tight junction
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116749482 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116749482 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
116749482 (NEDD4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116749482 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116749482 (NEDD4)
04121 Ubiquitin system [BR:
psiu04121
]
116749482 (NEDD4)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116749482 (NEDD4)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116749482 (NEDD4)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116749482 (NEDD4)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
HECT type E3
116749482 (NEDD4)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
116749482 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Reovirus_L2_N
Motif
Other DBs
NCBI-GeneID:
116749482
NCBI-ProteinID:
XP_032479762
Ensembl:
ENSPSNG00000002691
UniProt:
A0A8C9B218
LinkDB
All DBs
Position
2:78857434..79036775
Genome browser
AA seq
901 aa
AA seq
DB search
MAACAVEVFGVPEDEETSRIVRVKVIAGIGLAKKDILGASDPYVRVTLYDPVNGVFTSVQ
TKTIKKTLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRM
ERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPKTSGSEEDNTEQAEELEPGWVVLDQPDA
ACHLQQQPEPSPLPPGWEERQDILGRTYYVNHESRRTQWKRPTLQDNLTDAENGNIQLQA
QRAFTTRRQISEETESVYSRESSENWEVIREDEATMYIHQAFPSSPPSNNLDVQTNLAEE
LNARLTVYGNSATGQPVSSSNHSSRRGSLQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDE
RGRSYYVDHNCRTTTWIKPTVQTTVETSQLPSSQGSSAGPHPQAPTSDAAQQVTQPSEVE
QGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHVRGKTSLDSSNDLGPLPPGW
EERTHTDGRIFYINHNIKRTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRRKLKKQNDI
PNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKE
MFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRP
FYKMMLHKPITLHDMESVDSEYYNSLRWILENDPTELDLRFVIDEELFGQTHQHELKNGG
SEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCG
LGDVDVNDWREHTKYKNGYSVNHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFA
ELYGSNGPQSFTVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENTQGFDGV
D
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttgcgcggtggaggtgttcggagtcccggaggacgaggaaacttcccgaatt
gtgagggtaaaagttatagctggaataggccttgccaaaaaggatatcttgggagctagt
gatccttatgtgagagtgaccttatatgacccagtgaatggagtttttacaagtgtgcaa
acgaaaaccattaaaaagactttgaatccaaaatggaatgaagaaatattattcagagtt
caccctcagcagcaccggcttctttttgaagtgtttgatgaaaatcgattgacaagagat
gatttcctaggtcaagtggatgttcctctttatccattaccgacagaaaatccaagaatg
gagagaccatatacatttaaggattttgttcttcacccaagaagtcacaaatcaagagtt
aaaggttatctgagattaaaaatgacttacttacctaaaaccagtggctcagaagaagat
aacacagaacaggctgaggaattagagcctggctgggtggttttggaccaaccagatgct
gcttgccatttgcagcagcaaccagaaccttcccctctacctccaggatgggaagagagg
caggatattcttggaaggacctactatgtaaaccatgaatctagaagaacacagtggaaa
agaccaacccttcaggacaacctaacagatgctgagaatggtaacattcaactgcaagcc
cagcgtgcattcaccaccaggcggcagatatctgaggaaacagaaagtgtttacagccga
gagtcttccgagaactgggaagttataagagaggatgaagccaccatgtacatccatcag
gccttcccctcatctccaccatcaaataacttggacgtccagactaatcttgcagaagaa
ttgaatgccagactcactgtttatggaaattcagccactggccagccagtatccagctca
aatcattccagcagaagaggcagcttacaagcctatacttttgaggaacagcctacactt
cctgtgctcttgcctacttcatctggattaccaccaggttgggaagaaaaacaagatgaa
agaggaagatcatattacgtggatcataattgcagaactactacctggataaagcccact
gtacagaccacagtggagaccagtcagctaccgtcaagccagggttcttctgcaggccct
cacccacaggcccccacgagtgacgcagcacagcaggtgacccagccatctgaagtggag
caaggattccttcccaaaggctgggaagtccggcatgcaccaaacgggaggcctttcttc
attgaccacaacaccaaaaccaccacctgggaagatccaagactgaaaattccagctcat
gtgagaggaaagacatcacttgattcctccaatgacctggggcctttacctccaggatgg
gaagaaagaactcacaccgatggaagaatcttctacataaatcacaatataaaaagaaca
caatgggaagatcctcggttgcagaatgtagcaataactggaccagcagtgccctactcc
agggattacaaaagaaagtatgagttcttccgaagaaagttgaagaagcagaatgacatt
ccaaacaaatttgaaatgaaacttcgccgtgcaactgtccttgaggactcttacaggaga
attatgggggtcaagagagcagacttcctcaaggctagactgtggattgagtttgatggc
gaaaagggactagattatggaggagtcgccagagaatggttctttctgatttcgaaggaa
atgtttaacccttattatgggttgtttgaatattctgctacggataattataccctacag
ataaatcccaactctggattgtgtaatgaagatcacctctcttacttcaagtttattggc
cgggtagctgggatggcagtttatcatggcaaactgttggatggctttttcatccgccca
ttttacaagatgatgctgcacaagccaataacacttcatgatatggaatcagtggatagt
gagtattacaattcactaagatggattcttgaaaacgatccaacagaactggacctcagg
tttgtcatagatgaagaactttttggacagacccatcaacatgagttgaaaaacggcgga
tcagaaatagtcgtcaccaataagaacaaaaaggaatatatttatcttgtaatacaatgg
cgatttgtaaaccgaatccagaagcaaatggctgcttttaaagagggattttttgaactg
ataccacaggatctcatcaaaatttttgatgaaaatgaactagagcttctgatgtgcggc
ttgggagatgtcgatgtgaatgactggagagaacacacaaagtacaaaaatggctacagt
gtaaatcatcaagtcatccagtggttttggaaggctgtcttaatgatggactcagaaaaa
agaatacgattacttcagtttgtcactggcacatcccgtgtgcctatgaatggatttgct
gaactgtatggctcaaacggaccacagtcatttacagttgagcagtggggcacccctgag
aagctgccaagagctcatacgtgctttaatcgcttggacttgccaccgtatgagtcattt
gaagaattatgggataaacttcagatggccattgagaacactcagggttttgatggcgtt
gattag
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