Phocoena sinus (vaquita): 116749823
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Entry
116749823 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05134
Legionellosis
psiu05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116749823
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
116749823
09174 Infectious disease: parasitic
05140 Leishmaniasis
116749823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116749823
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116749823
03012 Translation factors [BR:
psiu03012
]
116749823
04131 Membrane trafficking [BR:
psiu04131
]
116749823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116749823
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116749823
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116749823
Translation factors [BR:
psiu03012
]
Eukaryotic type
Elongation factors
116749823
Membrane trafficking [BR:
psiu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116749823
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116749823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
116749823
NCBI-ProteinID:
XP_032480479
LinkDB
All DBs
Position
2:complement(163326289..163327759)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCCGIDKRTIEKFKKEAAEMGKRSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTCEHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTAAFVPVSGWNDENMLEPSANMLWFKGXKVTHKDGSASGTTLLEALDCVLPPTR
PTDKPLCLPLQDIYKIGGIGTVPVGRVETGVLKPGLVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNMSVKDVRRGNVAGESKNDPQMEAAGFTAQVIILNHPGQTSVGCAAV
LDCHLAHIACKFAELKEKIDRRSGKKLEDGPNSLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQRAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagacgcacatcaacatcgttgtcatcggacacgtagattccgggaag
tccaccactactggccatctgatctacaaatgttgtgggatcgacaagagaaccattgaa
aagttcaagaaggaggctgccgagatggggaagcgctctttcaagtatgcctgggtcttg
gacaaactgaaagctgaacgcgagcgtggtatcaccattgatatatccctatggaaattc
gagaccagcaagtactatgtgacaatcattgatgccccaggacacagagacttcatcaaa
aacatgattacaggtacatcccaggctgactgtgctgtcctgattgttgctgctggtgtt
ggtgaatttgaagcaggtatttccaagaatgggcagacctgtgagcatgcccttctggcc
tacactctgggtgtgaaacaactaattgttggagttaacaaaatggattccaccgagcca
ccatacagccagaagagatacgaggaaattgtaaaggaagtcagcacctacattaagaaa
attggctacaatcccgacacagcagcatttgtgccagtttctggctggaatgatgaaaac
atgctggagccaagtgctaacatgctgtggttcaagggatagaaagtcacccataaggat
ggcagtgccagtggaaccacactgcttgaagctctagattgcgtcctgccaccaactcgc
ccaactgacaaacccttgtgtttgcccctccaggacatctacaaaattggtggtattggc
actgtccctgtgggtcgagtggagactggtgttctcaaacctggcctggtggtcaccttt
gctccagtcaatgtgacaactgaagtgaaatctgttgaaatgcaccatgaagctttgagt
gaagcccttcctggggacaatgtgggcttcaatgtcaagaacatgtctgtcaaagatgtt
cgtcgtggcaatgtggctggtgagagcaaaaatgacccacaaatggaagcagctggcttc
acagctcaggtgattatcttgaaccatccaggccaaaccagtgttggctgtgcagctgtg
ctggattgtcacctagctcacattgcctgcaagtttgctgagctgaaggagaagattgat
cgtcgttctgggaaaaagctggaagatggccccaattccttgaaatctggtgatgctgcc
atcgttgatatggttcctggcaaacccatgtgtgttgagagcttctctgactatcctcct
ctgggccgctttgctgttcgtgacatgagacagacggttgctgtgggtgtcatcaaagca
gtggacaagaaggcagctggagctggcaaggtcaccaagtctgcacagaaagctcagagg
gctaaatga
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