Phocoena sinus (vaquita): 116749863
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Entry
116749863 CDS
T07759
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116749863 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116749863 (AQR)
Spliceosome [BR:
psiu03041
]
Complex B
Other components
Prp19-related factors
116749863 (AQR)
Complex C
116749863 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
Parvo_NS1
UvrD_C_2
AAA_16
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
116749863
NCBI-ProteinID:
XP_032480561
Ensembl:
ENSPSNG00000004756
UniProt:
A0A8C9B7T5
LinkDB
All DBs
Position
2:99057288..99176577
Genome browser
AA seq
1485 aa
AA seq
DB search
MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDDFP
FFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSE
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
IRESLIKFFGPLSSNTLHQVASYLCLLPTLPKGEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPSIGENWPTRVRADVS
IHLNVRDHIRDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFVEQVGLVYVRGCEVQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFFS
IEHLKTSFPGHNVKVTVDDPALQIPPFRITFPVRNGKGKKRKDAEKEDEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPD
VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
QTLLQLPPAMLEEGEEVQSQETELETEEEATPAQADIVPSLTDTSPSQETSASQTETIPS
HTGDSSSSEAIPTESEITATVAEPVAVPAENNTPQDATSAPRETK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgctcaacccaagaaaatcgtggcccctacggtgtcccagatcaacgcg
gagttcgtgacccagttagcatgtaaatactgggctccccatatcaagaaaaaatcacct
tttgatataaaggtgattgaagatatatatgagaaagaaattgtcaaatcaaggtttgcc
atcagaaagataatgctcttggaatttagccagtatcttgaaaattacctctggatgaat
tattctccagaagtgtccagcaaagcctatttaatgtcaatctgctgtatggtgaatgag
aagttcagagaaaatgtccctgcatgggagacttttaagaagaagccagatgacttccca
ttctttttcaagtgtatcttgaaagcagcattagctgaaactgatggtgaattttcactc
catgaacagacagtcttattgctttttcttgatcattgcttcaatagtttggaagtagac
ttgatacggagtcaagtacagcagctcatctccctcccaatgtggatgggcttacagcct
gcacgattggaattagaattaaaaaagacacctaaactaagaaaattctggaacttgatt
aaaaagaatgatgaaaagatggatccagaagcaagagaacaagcctatcaagaaagaaga
tttctttcacagctcatccagaagtttatctctgtgctgaagtcagttccactttctgaa
cctgtcactatggacaaagttcattattgtgaaagatttattgaacttatgattgatcta
gaggccctactccccacaagacgctggtttaataccatcctggatgactcccaccttttg
gttcactgttacctttccaatcttgttcgtagagaagaggatggccatcttttttcccag
cttttggacatgcttaagttctatactggttttgagattaatgatcagactggaaatgct
ctgacagagaatgagatgactacgattcactatgatagaattacttctttacagagagct
gcttttgcacatttccctgaactctatgattttgccctctcaaatgttgcagaagtagat
attcgggaatccttgatcaagttttttggacctcttagttcaaatacactccaccaggtg
gcatcatacctctgcttgttaccaactcttcctaaaggtgaagacacgacttttgataaa
gaatttcttctagaattgttggtatctcgtcatgagcgtcgaatttctcagattcagcag
ttgaaccagatgcctttgtatccaaccgaaaaaatcatatgggatgaaaatattgtccca
actgagtactattctggggaaggttgtcttgctcttcccaagttgaatttgcagtttttg
actcttcatgattacctcctaaggaactttaatctcttccgcttagaatcaacttatgaa
attaggcaggacatcgaggatagtgtcagcagaatgaagccatggcagtctgagtatggc
ggggtggtattcggtggctgggcgcgaatggcccagcccatcgtggcgttcactgtggtg
gaggttgccaaacccagcataggcgagaactggccaacccgggttcgcgcagatgtcagc
atccatctgaacgtcagagaccacatcagagatgagtgggaaggacttcggaagcatgat
gtatgctttttaattaccgtacgtcccacaaaaccttatggtaccaagtttgaccggagg
agaccttttgttgagcaggttggcctggtttatgtcagaggctgtgaggtccagggcatg
ctggacgataaagggcgtgtcattgaagacggacctgaacccagacccaatcttagagga
gaatcaaggacatttagagtgtttttggatccaaaccagtatcaacaagatatgaccaat
acaatacaaaatggagcagaagatgtgtatgaaactttcaatataataatgaggagaaaa
ccgaaggaaaataactttaaggctgtgctggagactattcggaacctgatgaatactgat
tgtgtggtacctgactggctgcatgacatcattttaggttatggggatccaagtagtgca
cattattccaaaatgcccaatcagatcgccacccttgatttcaatgatacatttttctcc
attgagcatttaaaaaccagctttcctggtcataatgttaaagtaactgtggatgaccca
gctctacagataccccctttcaggataacttttccagtaagaaatggaaaggggaagaaa
aggaaagatgcagagaaggaagatgaagacactgaagaggcaaaaaccttaattgttgaa
cctcatgttattcctaatagaggtccttatccttacaaccagcccaaacggaatacaatt
cagttcactcatacacagatagaggccatccgtgctggaatgcagcctgggctaactatg
gttgtgggcccaccaggtacaggaaaaacagatgtggcggtccaaatcatatccaacatc
taccacaatttcccagagcagaggactctgattgttactcattccaatcaggccctgaac
cagttgtttgagaaaatcatggctttagacattgacgagcgtcacctcctgcgtcttggt
catggagaagaagagctggagacggagaaagatttcagcaggtatggaagagttaattat
gtcctagctcgaagaatagagcttttagaagaagtcaaacgattgcagaagagtctaggg
gttccaggagatgcttcgtatacttgtgaaactgcaggctatttcttcttatatcaggta
atgtctcgttgggaagagtatatcagcaaagtgaaaaataaaggtaacacgttgccagat
gttactgaagtctctactttcttcccttttcatgagtactttgcaaatgcccctcaaccc
atttttaaaggccgatcttatgaagaagacatggaaattgctgaaggatgtttcaggcat
attaagaaaatctttactcagcttgaggagtttagagcctccgaactgcttcgaagtgga
ctagacagatctaaataccttttggtgaaagaagccaaaatcattgctatgacctgtact
catgctgccttaaaacgacatgatttagtcaagttaggcttcaagtatgacaacatttta
atggaagaggctgctcagattctggagatagaaacttttatacctcttcttctacagaat
cctcaggatggttttagccgactaaaacgttggattatgattggtgatcatcaccagtta
cctccagtcattaagaacatggccttccagaagtattcaaacatggagcaatctctcttc
actcgctttgtcagagttggagttcctactgtggacctcgatgcccaagggagggccaga
gcaagcttatgcaacctctacaactggcgatacaagaatctaggaaacttaccccacgtg
cagctcttgcctgagtttagtacagcaaatgccggcttgctttatgacttccagctcatt
aatgttgaagattttcagggagttggagaatctgagcctaatccttacttttatcagaat
cttggagaggcagaatacgtagtggcactttttatgtacatgtgcttacttggttaccct
gctgacaagattagcattctaacaacatataatggacaaaagcatcttattcgtgacatc
atcaatagacgatgcgggagcaatccattgattggaagaccaaataaggtgacaaccgtt
gacagatttcaaggtcaacagaatgattatattcttctttctctagtacgaacgagggca
gtgggccatctgagggatgtccgtcgcttagtggtggccatgtctagagccagacttgga
ctttatatcttcgccagagtatccctcttccaaaactgttttgaactaactccagctttc
agccagctcacagcccgcccacttcatttgcatataattccaacagaacctttcccaacc
agtagaaagaatggagagagaccatctcatgaagtacagataataaagaatatgccccag
atggcaaactttgtatacaacatgtatatgcatttgatacagaccacacatcattatcat
cagactttattacagctaccacctgctatgctagaagaaggtgaagaagttcaaagtcag
gaaacagaattggaaacagaagaagaggccacacctgctcaagctgacattgtacctagt
ctaacagataccagccccagtcaagaaacctcagcctctcagactgagaccatccctagt
cacacaggagacagttccagttcagaggccatccctactgaatccgagatcactgctact
gtggcagaacctgtagctgtaccagcggagaataacacccctcaagatgccacatccgcc
cccagagaaaccaagtag
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integrated database retrieval system
