Phocoena sinus (vaquita): 116749886
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Entry
116749886 CDS
T07759
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05202
Transcriptional misregulation in cancer
psiu05206
MicroRNAs in cancer
psiu05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116749886 (ZEB1)
05206 MicroRNAs in cancer
116749886 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
116749886 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116749886 (ZEB1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116749886 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
116749886
NCBI-ProteinID:
XP_032480588
Ensembl:
ENSPSNG00000003104
LinkDB
All DBs
Position
2:3048015..3238608
Genome browser
AA seq
1113 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGAPED
GLPTDQAVLPGSSAREGDVKSCWEDDAGKEGQEILGPEARADEVGGTVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCPSPSLSASPGSPTRPQTRQKIENKPFREQLSVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGGPLQATSTPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETISASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DISALPELKHYDLKQPAQPRLPPTPEGAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQTGQTSVQSSEASSPEPGKANIPAKND
DQPQPTNADESQDGTRNLQSPLKITSSPVLPVGSAVNGSRSSASSPSPLNLSSSGNAQGY
SYPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTLLIP
QVAYTYSTAVSPAAQEAALRAAQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHTRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEGPEPGAAGPGGPPAHHAGARASPSQGDS
DERESSTREEDEDSDKEEEEEEEEREMEDLQEEKESGGPQGGEGREGEGREGEGRANSEG
AREGAGAGSPAHSLEHKVSQGAEQVSEEKTNEA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaactataatactgtggtagaaacaaattcagattcagacgatgaagacaaactccac
attgtggaagaagaaagtatcacggatgcagcagactgtgaaggcggcgccccagaagat
ggcctgccgacagaccaggcagtgctacctgggagcagcgcaagggaaggggacgtgaag
agctgctgggaagacgatgcaggaaaggaaggacaagaaatcctggggcctgaagctcgg
gcagatgaagtgggaggtacagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcctaacgttgaagagttcctgcagcaacaagacactgcagtcatctac
cccgaggcgcccgaggaggaccagaggcagggcacgccggaggccagcgggcacgatgaa
aacggaacaccagatgcattttcccagttacttacctgcccatattgtgacagaggatat
aaacgctttacctctctgaaagaacacattaaatatcgccatgaaaagaacgaagacaac
ttcagttgctccctgtgcagttacacctttgcgtacagaacccagctcgaacgtcacatg
acctcccataaatcaggaagagatcaaagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tccggttcctatagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcgaccacgaacagggctcaagacctcgcagtgtccctcaccatctctctcggcatca
ccaggcagtcccacgcgaccacagacacggcagaagatagagaataagcccttccgagaa
caactttccgtaaaccaaatcaaaactgagcctgtggattatgagttcaagcccatagtg
gttgcttcaggaatcaactgttcaacccctttacagaatggggttttcagtggtggtggc
cccttgcaggcaaccagtactcctcagggtgtggtgcaggccgttgttctgccaacggtg
gggctggtgtcccccatcagtatcaacttgagtgatattcagaatgtacttaaagtggca
gtagatggtaatgtaatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcagcgcttcatccatccagcaaggtggccattctgttatttcagcc
atcagtcttcctctggttgatcaagatggaacaaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttaaaaaaagaaaatccagtcccc
accaacagttgcaaaagtgaaaagttaccagaagatcttactgttaaatctgagaaggac
aaaagctttgaaggaggagggaatgacagcacttgcctcctgtgtgacgactgtccaggg
gacatcagcgcacttccggagctaaagcactatgacctgaagcagcccgcccagccccgt
ctgccccccacaccagaaggtgccaagcccgaggcctctgctccctcggggtccggagac
ggcagtctgtctcccagccagccacctttaaagaacctcctgtctcttctgaaagcatat
tatgctttgaatgcacagccaagtgcagaagagctctcaaaaattgctgactcagtgaac
ctaccgccggatgtagtgaaaaagtggtttgaaaagatgcagacgggacagacttcagtg
cagtcttctgaagcatcttctcccgagccaggcaaagccaacatccctgctaagaacgat
gatcagcctcagcccacaaacgcagatgaatcccaggacggcacaaggaatctccagagt
cctctgaagataactagctcccccgtcctaccggtgggctccgcggtcaatggttccaga
agcagcgcatcatccccatcccccctcaacctctcctcctccggaaacgcacagggttac
tcgtacccggcagaaggggcacaggaagagccacaagtcgaacctcttgatctttcacta
ccaaagcaacagggagagttattggaaaggtcaactatcactagtgtttaccagaacagt
gtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgtcacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctacagtcactgcccagttacccacgatcgtggccatcgccgac
cagaacagcgttccgtgcttgcgagcgctggcggccaacaagcagaccctgctgatcccc
caggtcgcctacacgtactcgactgcagtcagcccggcggcccaggaagcagccctgagg
gcggcccagcccaacggaaatcaggatgaaaggcaagacactagctcagaaggagtatca
aatgtagaggatcagaatgactctgattccacgccacccaaaaagaaaatgcgaaagaca
gaaaatgggatgtatgcttgtgatttgtgtgataagatattccagaagagtagctcgttg
ttgagacataaatacgaacacacaggtaaaagacctcacgagtgcggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacacgcgcttgcattccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctattcccagcacatg
aaccaccgctactcctactgcaagagggaggccgaggggcccgagccgggggccgcgggc
ccagggggcccgcccgcgcaccacgcgggggcccgcgcctccccctcgcagggcgactct
gacgagagggagagctccacgcgggaggaggacgaggacagtgacaaggaggaggaggag
gaggaggaggagagggagatggaagacctgcaggaggaaaaggaaagtggaggaccgcag
gggggggaggggcgcgagggggaggggcgcgagggggaggggcgagccaactccgaaggt
gcgagggagggcgcaggagctggaagcccagcccacagtttagaacacaaagtcagccag
ggcgctgagcaggtgtctgaagagaaaacaaatgaagcctga
DBGET
integrated database retrieval system
