KEGG   Phocoena sinus (vaquita): 116749897
Entry
116749897         CDS       T07759                                 
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
  KO
K20721  reticulon-1
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psiu04131]
    116749897 (RTN1)
   03036 Chromosome and associated proteins [BR:psiu03036]
    116749897 (RTN1)
Membrane trafficking [BR:psiu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    116749897 (RTN1)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116749897 (RTN1)
SSDB
Motif
Pfam: Reticulon
Other DBs
NCBI-GeneID: 116749897
NCBI-ProteinID: XP_032480611
Ensembl: ENSPSNG00000009742
UniProt: A0A8C9BXC6
LinkDB
Position
2:complement(136414881..136654393)
AA seq 817 aa
MAAPPDPKEELLPLASPGSQWFGDRSEGEEEAVTPKGAKPEPQVGEPGPGLGSGAREAAP
RELGSGPARPPPVAMETASTGAADVSRAMDRTFSTAAKDGEGVCYTSLISDICYPPREDS
TYFTGILQKENSHITTSESPEELRTPGPSLPDVPGTEPRGLFSSDSGIEMTPAESTEVNK
ILADPLDQMKAEAYKYIDITRPEEVKYQEQRHPKLEEKDLDFKNEDTDISAKSGEAREAE
KPSPVEGKILKDHLFEESTFEPYVDDISEAQHGAPLITAPVRITLTEIEPSVETATPEET
PEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAI
KEAKGLSFETTESPRPAGQVADRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDP
LAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEES
PKREQDSPPMKPGALDAIREEPGTRAEERAHSRQGLAEPEPFLKFPSAAPQVCSELPSGD
GAPAPEGPAVPRTPVEAASYDQSSQATKGPGPQGPGVVPPLLFLNKQQAIDLLYWRDIKQ
TGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAY
LELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFN
GLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKRFRFNVAEQILQFQPRI
YFSFSRHHLGFRLKSQALKGTLSKSVPHQGLDTKRNV
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggccgcgccgcccgatcccaaagaagagctgctgccgctggccagtcccgggtcccag
tggttcggggaccggagcgagggggaggaagaagcggtgacgccgaaaggggccaagccc
gagccgcaggtgggggagcccggccctgggctgggctccggggcccgagaagctgcgccg
cgggaactgggctcgggccccgcccggccgccgcccgttgccatggaaactgcatccaca
ggtgcagcagatgtttccagggccatggatcgtaccttttcaacagcagcaaaagatggg
gaaggagtgtgttacacatctctgatttctgacatctgttacccacctcgggaggattct
acatatttcactggaattcttcagaaggaaaacagccacatcaccacttcagagagccct
gaggagttgcgtacccccggtccctccttaccggatgtgcctgggacggagcctcgtggc
ttatttagttctgattctggaatagaaatgactcctgcagagtccactgaagtgaacaag
atcttagcagaccccctggaccagatgaaagcagaagcctataaatacattgacataact
aggccagaggaggtgaaatatcaggagcaacgtcaccccaagttggaagagaaagacttg
gactttaagaatgaggacactgacatctcagcaaaatccggagaggcccgtgaagcagag
aaaccatctcctgtggagggaaaaatcctcaaggaccatttatttgaagaatcaacgttt
gaaccatatgtagacgacatctctgaagcacagcacggtgctcctctgatcacggctcct
gtcagaatcacgctgactgagatcgagccttctgttgaaactgctaccccagaggagacc
cccgagaagcaagatatctgcctgaaaccaagtcctgacacagtccccacagtcaccgtc
tcagagcctgaagacgacagcccaggatccgtcactcctccgtcttctggaacagaacca
tctgctgcagaatcccaggggaaatgcagcatctccgaggatgagctgatcactgccatt
aaggaagcaaaggggttgtccttcgaaacaacggagagtccacggccagcgggccaggtg
gccgacaggccggaggccaaggccaggtccgggctgcccaccatccctagccccctggac
cacgaggccagcagcgcggagtcaggggactcggagatcgagttggtgtccgaggacccg
ctggccgccgaggacgctctgccctcgggctacgtgacctttggtcatgtgggtggcccg
ccgccgtcgccggcctctccgtccatccagtacagcatcctgagggaggagcgtgaggct
gagctggacagcgagctcatcatcgagtcgtgtgacgcctcctccgcctcggaggagagt
cccaaacgggagcaggactcgccgcccatgaagccgggtgccctggatgccatccgggag
gagccgggcacccgggccgaggagcgcgcccacagccggcagggcctggcggagccggag
cccttcctcaaattcccttcggccgccccacaagtctgctccgagctgccctctggagac
ggagcccctgcgcccgaggggcccgcagtgccacggacacctgtggaagcagcgagttac
gaccagagctcccaggccacaaagggccctgggcctcagggtccaggcgtcgtgccccct
ctgctgtttctcaataagcaacaagctattgacctgctgtactggagggacatcaagcag
acggggatagtgtttgggagcttcctgctgctactcttctccctgacccagttcagcgtt
gtgagtgtcgtggcctacctggcccttgctgcgctctcagccaccatcagtttccgcatc
tacaagtctgttttacaagctgtgcagaaaaccgacgagggtcaccctttcaaggcctac
ttggagcttgagatcacgctgtctcaggagcagattcagaagtacacagactgcctgcaa
ttctatgtgaacaacacgcttaaagaactgaggaggctcttccttgtccaggacctggtg
gattccttaaaatttgcagtcctgatgtggctcctgacttacgttggcgctctcttcaat
ggcttgaccctgctgctcatggctgtggtttcaatgtttactctacctgtagtgtatgtt
aagcaccaggcacagattgaccaatatctgggacttgtgaggactcacataaatgctgtt
gtggcaaaacgtttcagattcaacgtggccgaacagatcttgcaatttcagcccagaatt
tatttttccttcagtcgtcaccatcttggattcaggctaaaatcccaggcgctaaaaggc
acactgagtaaatcagtaccccaccagggactggacaccaagaggaatgtctga

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