Phocoena sinus (vaquita): 116749897
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Entry
116749897 CDS
T07759
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116749897 (RTN1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116749897 (RTN1)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116749897 (RTN1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116749897 (RTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
116749897
NCBI-ProteinID:
XP_032480611
Ensembl:
ENSPSNG00000009742
UniProt:
A0A8C9BXC6
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Position
2:complement(136414881..136654393)
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AA seq
817 aa
AA seq
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MAAPPDPKEELLPLASPGSQWFGDRSEGEEEAVTPKGAKPEPQVGEPGPGLGSGAREAAP
RELGSGPARPPPVAMETASTGAADVSRAMDRTFSTAAKDGEGVCYTSLISDICYPPREDS
TYFTGILQKENSHITTSESPEELRTPGPSLPDVPGTEPRGLFSSDSGIEMTPAESTEVNK
ILADPLDQMKAEAYKYIDITRPEEVKYQEQRHPKLEEKDLDFKNEDTDISAKSGEAREAE
KPSPVEGKILKDHLFEESTFEPYVDDISEAQHGAPLITAPVRITLTEIEPSVETATPEET
PEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAI
KEAKGLSFETTESPRPAGQVADRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDP
LAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEES
PKREQDSPPMKPGALDAIREEPGTRAEERAHSRQGLAEPEPFLKFPSAAPQVCSELPSGD
GAPAPEGPAVPRTPVEAASYDQSSQATKGPGPQGPGVVPPLLFLNKQQAIDLLYWRDIKQ
TGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAY
LELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFN
GLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKRFRFNVAEQILQFQPRI
YFSFSRHHLGFRLKSQALKGTLSKSVPHQGLDTKRNV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgcccgatcccaaagaagagctgctgccgctggccagtcccgggtcccag
tggttcggggaccggagcgagggggaggaagaagcggtgacgccgaaaggggccaagccc
gagccgcaggtgggggagcccggccctgggctgggctccggggcccgagaagctgcgccg
cgggaactgggctcgggccccgcccggccgccgcccgttgccatggaaactgcatccaca
ggtgcagcagatgtttccagggccatggatcgtaccttttcaacagcagcaaaagatggg
gaaggagtgtgttacacatctctgatttctgacatctgttacccacctcgggaggattct
acatatttcactggaattcttcagaaggaaaacagccacatcaccacttcagagagccct
gaggagttgcgtacccccggtccctccttaccggatgtgcctgggacggagcctcgtggc
ttatttagttctgattctggaatagaaatgactcctgcagagtccactgaagtgaacaag
atcttagcagaccccctggaccagatgaaagcagaagcctataaatacattgacataact
aggccagaggaggtgaaatatcaggagcaacgtcaccccaagttggaagagaaagacttg
gactttaagaatgaggacactgacatctcagcaaaatccggagaggcccgtgaagcagag
aaaccatctcctgtggagggaaaaatcctcaaggaccatttatttgaagaatcaacgttt
gaaccatatgtagacgacatctctgaagcacagcacggtgctcctctgatcacggctcct
gtcagaatcacgctgactgagatcgagccttctgttgaaactgctaccccagaggagacc
cccgagaagcaagatatctgcctgaaaccaagtcctgacacagtccccacagtcaccgtc
tcagagcctgaagacgacagcccaggatccgtcactcctccgtcttctggaacagaacca
tctgctgcagaatcccaggggaaatgcagcatctccgaggatgagctgatcactgccatt
aaggaagcaaaggggttgtccttcgaaacaacggagagtccacggccagcgggccaggtg
gccgacaggccggaggccaaggccaggtccgggctgcccaccatccctagccccctggac
cacgaggccagcagcgcggagtcaggggactcggagatcgagttggtgtccgaggacccg
ctggccgccgaggacgctctgccctcgggctacgtgacctttggtcatgtgggtggcccg
ccgccgtcgccggcctctccgtccatccagtacagcatcctgagggaggagcgtgaggct
gagctggacagcgagctcatcatcgagtcgtgtgacgcctcctccgcctcggaggagagt
cccaaacgggagcaggactcgccgcccatgaagccgggtgccctggatgccatccgggag
gagccgggcacccgggccgaggagcgcgcccacagccggcagggcctggcggagccggag
cccttcctcaaattcccttcggccgccccacaagtctgctccgagctgccctctggagac
ggagcccctgcgcccgaggggcccgcagtgccacggacacctgtggaagcagcgagttac
gaccagagctcccaggccacaaagggccctgggcctcagggtccaggcgtcgtgccccct
ctgctgtttctcaataagcaacaagctattgacctgctgtactggagggacatcaagcag
acggggatagtgtttgggagcttcctgctgctactcttctccctgacccagttcagcgtt
gtgagtgtcgtggcctacctggcccttgctgcgctctcagccaccatcagtttccgcatc
tacaagtctgttttacaagctgtgcagaaaaccgacgagggtcaccctttcaaggcctac
ttggagcttgagatcacgctgtctcaggagcagattcagaagtacacagactgcctgcaa
ttctatgtgaacaacacgcttaaagaactgaggaggctcttccttgtccaggacctggtg
gattccttaaaatttgcagtcctgatgtggctcctgacttacgttggcgctctcttcaat
ggcttgaccctgctgctcatggctgtggtttcaatgtttactctacctgtagtgtatgtt
aagcaccaggcacagattgaccaatatctgggacttgtgaggactcacataaatgctgtt
gtggcaaaacgtttcagattcaacgtggccgaacagatcttgcaatttcagcccagaatt
tatttttccttcagtcgtcaccatcttggattcaggctaaaatcccaggcgctaaaaggc
acactgagtaaatcagtaccccaccagggactggacaccaagaggaatgtctga
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